Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00079 ATGAACACATCAATGACTGCTTCTTTCTTGGTTTTGTTGTTGGCTTTTCCTTGTGTATTTGCAACTGATTACACTGTTGGTGATGCTAACCAATGGACTCAAGGTGTTGATTACACCACATGGACTTCTGGAAAAACTTTCAAAGTTGGTGATAATTTAGTGTTCAAATATGGAGGAACTCACCAAGTGAATGAAGTTGATGAGAGTGATTACAAAAGTTGCAGTTCAAGCAACACCATAAAGAATTACAACGATGGAGATTCAAAGGTTCCATTAACAAAAGCAGGAAAAATTTACTTCATATGTCCAACAACAGGCCATTGTACTGTTGGAATGAAGCTTGAAGTCGATGTTGTTGCTGCTAGCACCACCCCAACTCCAAGTGGCACCCCTCCAACAACAAAAACTCCTGCTCCATCAACAACACCATCAACTACTCCATCAACTCCATCTTCTGAGACTAATTCAACTTCTCCATCACAACCAAAAGATAGTGGAGCTGTTAGTGTTTCAAATGGTGTTGGTATTTTGATGGGTTCTTTGTTTGTGGTTTTGGGTTTCATGGGCTAG 570 0.3982 MNTSMTASFLVLLLAFPCVFATDYTVGDANQWTQGVDYTTWTSGKTFKVGDNLVFKYGGTHQVNEVDESDYKSCSSSNTIKNYNDGDSKVPLTKAGKIYFICPTTGHCTVGMKLEVDVVAASTTPTPSGTPPTTKTPAPSTTPSTTPSTPSSETNSTSPSQPKDSGAVSVSNGVGILMGSLFVVLGFMG 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00079 189 Gene3D - 20 124 IPR008972 -
Vifa4g00079 189 MobiDBLite consensus disorder prediction 122 168 - -
Vifa4g00079 189 FunFam Blue copper 20 124 - -
Vifa4g00079 189 CDD Phytocyanin 22 118 - -
Vifa4g00079 189 MobiDBLite consensus disorder prediction 139 168 - -
Vifa4g00079 189 ProSiteProfiles Phytocyanin domain profile. 22 120 IPR003245 GO:0009055
Vifa4g00079 189 PANTHER BLUE COPPER PROTEIN 19 135 IPR039391 GO:0009055
Vifa4g00079 189 Pfam Plastocyanin-like domain 32 112 IPR003245 GO:0009055
Vifa4g00079 189 SUPERFAMILY Cupredoxins 20 119 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00079 Vifa-Chr4 8624597 8625240 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g00079 17 121 Miscellaneous Gene Families AT3G60270 53.333 1.26e-37 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00079 - - gmx:100789844 197.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g00079 4 8624597 8625240 Vifa4g00079 4 8624597 8625240 ECH