Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00045 ATGGATTCATCGTCGAAAAACCAAACTCCAGAATATTACCAAAACGTCGTCGTAATGAGACACGGCGATCGCATCGACAACTTCGATCCGTTATGGATATCCACCGCGCAACGACCGTGGGACCCACCTCTCGTTGAAGAGGGTCGGGTTCGGTCCTTCTGTACGGGTCGGAAGTTTCGCAATCTTTTCAAATATCAGCTTCATCGTGTGTATGTCTCGCCGTTCCTCCGCTGTGTTCAGACCGCCGCCGAAGCCGTCATCGCTCTCTCCGCCGTTGATGATAGCCCCGAAGCACTCACCGGAGAGTCCGTTAGATTTGATCCTTCTAAAATTAAGGTCTCTGTTGAATATGGGTTATGCGAAATGATGAGCAGAATGGCAATTAGGCTTGACGTGGCTCCTAAAGATGGAAACTGGGGCTTTGACATATCAGAGCGCGAGGCCATGCTTCCTGCAGGGACGATCGATAAAAATGTAGAAAGGGTCTATAAAGAGTTGCCTAAGTATGAGGAACCGGTTGCCCACACGAAGGCTAGATATGAACGAATAGTTAAAGATCTTGCTGATAAACATCTTACTGAAAACTTGCTTCTTGTCACACATGGGGAAGGAGTTGGTGTGGCTCTATCTTCATTCAGAAAGGGTGCTGAAGTATATGAAGTTGACTATTGTGGATATGTCGAACTCAGACGCCCGATTTTCAAGAAAGACAAGTCATTTACTGCAGGACAATTCGAAGTGATTACTAATACCGGACAAACTGGCGTAAAATATTCCATCTAA 783 0.4636 MDSSSKNQTPEYYQNVVVMRHGDRIDNFDPLWISTAQRPWDPPLVEEGRVRSFCTGRKFRNLFKYQLHRVYVSPFLRCVQTAAEAVIALSAVDDSPEALTGESVRFDPSKIKVSVEYGLCEMMSRMAIRLDVAPKDGNWGFDISEREAMLPAGTIDKNVERVYKELPKYEEPVAHTKARYERIVKDLADKHLTENLLLVTHGEGVGVALSSFRKGAEVYEVDYCGYVELRRPIFKKDKSFTAGQFEVITNTGQTGVKYSI 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00045 260 PIRSF PRIB5 1 260 IPR012398 -
Vifa4g00045 260 Gene3D - 13 235 IPR029033 -
Vifa4g00045 260 FunFam Phosphoglycerate mutase family protein 12 235 - -
Vifa4g00045 260 Pfam Histidine phosphatase superfamily (branch 1) 17 86 IPR013078 -
Vifa4g00045 260 CDD HP 16 83 - -
Vifa4g00045 260 SUPERFAMILY Phosphoglycerate mutase-like 15 227 IPR029033 -
Vifa4g00045 260 PANTHER UBIQUITIN-ASSOCIATED AND SH3 DOMAIN-CONTAINING BA-RELATED 5 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00045 Vifa-Chr4 6249854 6251503 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00045 - - gmx:100811704 408.297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g00045 4 6249854 6251503 Vifa4g00045 4 6249854 6251503 ECH