Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00043 ATGTCTCTAACTATGCCATCAATCCTTGATGCATTGAACTCAATAACTTCAACTACAAAAACATCAAAACTAGTTGCTATAGTAGCAGATTATTTTGCTTATGAAGTTTTCGCATTTGCCAAGAAACTCAACATTTTATCTTACACATATTTTCCTTCATCAGCCACAGTGTTATCTCTTTGTTTTCATTCAACACTTCTAGATGAAACAATTTCTGGTGAATTTAGAGACTTGAAAGAACCAATCAAAATGCCAGGCTGTGTACCTATTCAAGGAACTGATCTTCCATCTTCATTTCAAGATAGGACTAGTGAATCTTATAAACAGTTTCTTCTCCGTTCGAAAGGAATAAATCTTTGCGACGGTATATTAGTAAATAGCTTTGTGGAATTGGAATCAGAAGCAGTTGAAGCCATGAATGAAGGAAGCATCAATGGTTCTCACCCTCCTGTTTACATGGTCGGACCAATCATGCAAAAAAATAGTGACAATAACCAAAATGAGTCACAATGTTTATCATGGTTAGATGAACAAAAACCAAATTCTGTGGTTTTTGTTTCATTTGGTAGTGGAGGAACAATCTCTCAAAACCAAATGAAATGA 603 0.3483 MSLTMPSILDALNSITSTTKTSKLVAIVADYFAYEVFAFAKKLNILSYTYFPSSATVLSLCFHSTLLDETISGEFRDLKEPIKMPGCVPIQGTDLPSSFQDRTSESYKQFLLRSKGINLCDGILVNSFVELESEAVEAMNEGSINGSHPPVYMVGPIMQKNSDNNQNESQCLSWLDEQKPNSVVFVSFGSGGTISQNQMK 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00043 200 PANTHER UDP-GLYCOSYLTRANSFERASE 72B1 4 199 - -
Vifa4g00043 200 Gene3D Glycogen Phosphorylase B; 171 200 - -
Vifa4g00043 200 Gene3D Glycogen Phosphorylase B; 1 170 - -
Vifa4g00043 200 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 15 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00043 Vifa-Chr4 6234378 6234980 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g00043 26 199 Glycosyltransferase AT4G01070 43.750 5.25e-48 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00043 K08237 - gmx:100808581 258.84