Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00037 ATGATTCAACAAATGCAACACGTCTGTGGTGACTGCAAAGGAACTGGTGAGGTCATTAGTGAGAGAGATAGATGTCCTCAATGCAAGGCAAACAAGATAACTCAAGAAAAGAAGGTGCTGGAGGTGCATGTGGAAAAGGGGATGCAGCAGGGTCAAAAGATTGTATTTGAAGGACAAGCTGATGAAGCCCCGGACACAATCACCGGAGACATAGCTCTCTGTGGCTTCCAATTTACTGTCACACATCTTGATGGAAGGCAACTCTTGGTCAAATCAAATCCCGGAGAAGTCATCAAGCCAGGTCAACACAAAGCTATTAATGACGAGGGAATGCCACAACACAATAGGCCCTTCATGAGGGGGACGCCTATACATCAAAGGTGCTTCGAAAGAAACAACATTACCACCGTGAGGGCATATGATGATGATGATGAAGACGAGCCCTCAGAGCCTCGAGTACAGTGTGCTCAGCAGTAG 477 0.4675 MIQQMQHVCGDCKGTGEVISERDRCPQCKANKITQEKKVLEVHVEKGMQQGQKIVFEGQADEAPDTITGDIALCGFQFTVTHLDGRQLLVKSNPGEVIKPGQHKAINDEGMPQHNRPFMRGTPIHQRCFERNNITTVRAYDDDDEDEPSEPRVQCAQQ 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00037 158 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 2 35 IPR036410 -
Vifa4g00037 158 FunFam DnaJ subfamily A member 2 1 32 - -
Vifa4g00037 158 Gene3D - 1 32 - -
Vifa4g00037 158 SUPERFAMILY HSP40/DnaJ peptide-binding domain 33 71 IPR008971 GO:0006457|GO:0051082
Vifa4g00037 158 Pfam DnaJ C terminal domain 28 72 IPR002939 -
Vifa4g00037 158 FunFam DnaJ subfamily A member 2 63 129 - -
Vifa4g00037 158 Gene3D - 70 126 - -
Vifa4g00037 158 PANTHER DNAJ-LIKE-2, ISOFORM A-RELATED 1 71 IPR044713 GO:0006457|GO:0030544
Vifa4g00037 158 SUPERFAMILY HSP40/DnaJ peptide-binding domain 72 122 IPR008971 GO:0006457|GO:0051082
Vifa4g00037 158 Gene3D - 33 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00037 Vifa-Chr4 6013049 6014105 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00037 K09503 - gmx:100812236 221.861