Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g04737 ATGTCTTCATCATCTTGTTCTTCCGCCGCCATCGACTCTCATACCCGCCGCAACCGCATCCTCTCTACCAACCTCTACTTCGACGTATCTCCCTCCAAGGTTCCGCTTATCTACTCCAACTCTTACGACATATCATTTCTCGGCATAGAGAAACTGCACCCTTTTGATTCATCCAAATGGGGACGAATTTGTAATTTCCTTGTCTCTTTTGGTCTGTTGGATCAAAATCGCATTGTTGAGCCTCTTGAAGCTTCTCAAGATGACCTTCTAGTGGTACACTCAAAATCATACTTGAATAGTCTGAACCGAAGTTCGAATGTTGCCAAGATAATTGAGGTCCCTCCTGTGGCATTTTTTCCCAATTGTCTGGTGCAACATAAAGTTCTTTTTCCATTTAGGAAACAGGTTGGAGGAACTATATTGGCTGCAAAACTTGCAAGGGAGAGAGGATGGGCCATTAATGTGGGAGGAGGTTTTCATCACTGTTCTGCAGAAAATGGAGGTGGATTTTGTGCTTACGCAGATATTTCTCTATGCATCCAATTTGCTTTTGTTCAGTTGAATATATCAAGGGTGATGATTATCGATCTTGATGCACATCAAGGAAATGGTCATGAAATGGACTTCGCCGATGATAACCGAGTCTACATTCTTGATATGTATAACCCTGGCATATATCCTTTGGATTATGAGGCAAGAAACTACATAAATCAGAAAGTTGAAGTGAAGAGCGGGACTCGTACAGAAGAGTACCTGCTAAAATTAGATGAAGCACTTGAGATTGCTGGGCGAAGGTTTAACCCTGAGTTGTTAGTTTATAATGCTGGAACTGACATCCTAGAAGGTGACCCATTAGGAAGGTTGAAGATTAGTCCTGACGGAATTGCTCTTAGAGATGAGAAAGTCTTCCGGTTTGCTCGTGAAAAGAACATTCCTATTGTCATGCTCACTTCAGGCGGATACATGAAGTCCAGTGCTAGAGTCATTGCTGACTCAATTGTGAATCTCGAGAACAAATGCTTGATAGAAACGAGTGGAGGTCGAAAGGCTGTATAA 1056 0.4233 MSSSSCSSAAIDSHTRRNRILSTNLYFDVSPSKVPLIYSNSYDISFLGIEKLHPFDSSKWGRICNFLVSFGLLDQNRIVEPLEASQDDLLVVHSKSYLNSLNRSSNVAKIIEVPPVAFFPNCLVQHKVLFPFRKQVGGTILAAKLARERGWAINVGGGFHHCSAENGGGFCAYADISLCIQFAFVQLNISRVMIIDLDAHQGNGHEMDFADDNRVYILDMYNPGIYPLDYEARNYINQKVEVKSGTRTEEYLLKLDEALEIAGRRFNPELLVYNAGTDILEGDPLGRLKISPDGIALRDEKVFRFAREKNIPIVMLTSGGYMKSSARVIADSIVNLENKCLIETSGGRKAV 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g04737 351 Pfam Histone deacetylase domain 53 334 IPR023801 -
Vifa3g04737 351 SUPERFAMILY Arginase/deacetylase 31 336 IPR023696 -
Vifa3g04737 351 CDD HDAC_classIV 53 336 IPR044150 GO:0004407|GO:0016575
Vifa3g04737 351 PANTHER HISTONE DEACETYLASE 2-RELATED 35 336 - -
Vifa3g04737 351 PRINTS Histone deacetylase superfamily signature 268 278 IPR000286 -
Vifa3g04737 351 PRINTS Histone deacetylase superfamily signature 191 206 IPR000286 -
Vifa3g04737 351 PRINTS Histone deacetylase superfamily signature 157 180 IPR000286 -
Vifa3g04737 351 FunFam Histone deacetylase 11 34 343 - -
Vifa3g04737 351 Gene3D Histone deacetylase domain 33 346 IPR037138 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g04737 K11418 - gmx:100781276 594.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g04737 3 1364562767 1364566210 Vifa3g04737 3 1364562767 1364566210 ECH