Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vifa3g04730 | ATGAGGGAAGAGATTAATAACAACAACCCATCAGAAAACAAGTCCAAAGCTTCGAAATTTGCCGATCAAAACCATCCTCCAAAGCTTCAAACTTCCAAAACAAACAACCCCAACAACAATCACTCAAAGCCAAGGCTATGGGGTGCACACATTGTCAAAGGCTTTTCAGCTGACAAGAAAACCAAACAACAATCCTCTCTTCCGACAAAAAAACAACAGACCTCGGATAATGCTAACCAGAAGAACCCTTTTGTTCCACCTCATTCGAGAGCCAAAAGATCCTTAATGGGTGATTTGTCATGTTCTCAGGTTCATCCACATGCTTTTCCAACGCATAGGAGACAATCATCAACTGATTTGTTCACGGAGTTGGATCATATGAGGAATTTATTGCAAGAGTCTAAGGAGAGGGAGAGTAAGCTGAATGCTGAGCTGGCTGAGTGTAGGAAGAACCGGAATGAGGTTGATGAGCTTGTGAAGAAAGTTGCTTTGTTGGAGGAAGAGAAAGCTAGTCTCTTTGAGCAATTGGCTGTATTGAGTAGGAGCTGTGGATTGGAGAGACAAGAGGAAGTGGTGAAAGGGGGAAATGAGGATAGTCCTATGCAGAATCTTGAGCTTGAAGTTGTTGAGTTGAGAAGGTTGAATAAGGAGCTGCATATGCAGAAGAGGAACCTCACTTGCAGGCTATCTTCTATGGAGTCTGAGTTGTCTAGTTCTGCAAACTCTTCAGAGAGTGACATTGTTGCCAAATTCAAAGCCGAGGCGTCATTGCTCCGGCTCACGAACGAAGACCTGAGTAAACAAGTAGAAGGTTTACAAACAAGCAGATTAAATGAGGTGGAGGAGCTTGCCTACTTGAGGTGGGTGAATTCGTGTTTACGAACCGAGTTGAAGAATACGTGCTCAACATTGGATTCTGATAAGCCATCTAGTCCTCAATCTGTTATGATTAGTAGTGGAGAATCTGTTATTTCTCTCTCTGATCAATGTGGTAGCGGAAATAGCTTCAATTTGGTCAAGAAGTTGAAAAAGTGGCCAAGAACTAGTAGTGATAATTTGTCACAAGTTGAGTCCACAAGTAGTACTAGTACTAGTAGTCTCTTTGAGAAAAATTGGATTGAATCAATATCTGAGGGAAGCAATAGAAGAAGACATTCGATTAGTGGTTCCAATAGCTCTGAGGAAGATGTTGTTGTATTGAATAAAAGAAGACAATCTAATTGTTTTGATTCCCTTGAATGTTTAAAAGAAATCGAAAAGGAACCGGTGCCATTGCCTTTGTTTGTTCAGCAATCTGTTATGGAGAAGAGGCCACTGAGGATTCCCAATCCTCCTCCAAGACCTACTTCATGTTCTATTACTAGCAAAACAAAACAAGAAAACCCGGATCAAGTTCAAGTTCAAGTTCAACCTCCTCCGCCTCCGCCTCCTCCACCACCTCCTATGAGTTTCGCATCAAAAAGTAACACGGCGATGGTAAAAAGAGCGCCACAAGTGGTGGAATTGTACCATTCACTCATGAAGAGAGATTCTAGAAAGGATTCTTCAAACGGAGGACTCGCTGATGCTCCTGATGTTGCAGATGTTCGTAGTAGCATGATTGGAGAAATTGAGAACCGTTCATCGCATTTACTTGCTATAAAGGAAGATATTGAAACACAAGGAGAATTCGTAAATTCACTTATTAGAGAGGTGAACAATGCGGTTTATCAGAACATTGACGATGTAGTGGCATTTGTGAAGTGGCTTGATGATGAACTTTGCTTCCTTGTGGACGAAAGGGCCGTCCTTAAACATTTTGATTGGCCAGAGAAAAAAGCCGACACATTAAGAGAAGCATCATTTGGATACCAAGATTTGAAAAAATTGGAATATGAAGTGTCCTCCTATAAGGACGATCCTCGGCTACCTTGTGATATTGCTCTAAAGAAAATGGTTGCTTTATCAGAAAAGATGGAACGCACGGTTTATGCTCTTCTCCGCACGAGGGACTCACTAATGCGAAATTGCAAGGAGTTTCAAATTCCTGTAGAATGGATGCTTGATAATGGAATTATTGGCAAGATAAAACTAGGGTCAGTTAAATTGGCCAAAAAGTATATGAAAAGGGTAGCCATGGAAGTTCAAACAAAGTCAGCATTTGACAAAGATCCTGCGATGGATTACATGGTTCTCCAAGGAGTGAGATTTGCTTTCAGAATCCATCAGTTTGCGGGAGGATTTGATGCAGAAACAATGCATGCGTTTGAGGAACTTCGCAATCTTGCTTCTCTACTAAACAAGACATAA | 2289 | 0.4137 | MREEINNNNPSENKSKASKFADQNHPPKLQTSKTNNPNNNHSKPRLWGAHIVKGFSADKKTKQQSSLPTKKQQTSDNANQKNPFVPPHSRAKRSLMGDLSCSQVHPHAFPTHRRQSSTDLFTELDHMRNLLQESKERESKLNAELAECRKNRNEVDELVKKVALLEEEKASLFEQLAVLSRSCGLERQEEVVKGGNEDSPMQNLELEVVELRRLNKELHMQKRNLTCRLSSMESELSSSANSSESDIVAKFKAEASLLRLTNEDLSKQVEGLQTSRLNEVEELAYLRWVNSCLRTELKNTCSTLDSDKPSSPQSVMISSGESVISLSDQCGSGNSFNLVKKLKKWPRTSSDNLSQVESTSSTSTSSLFEKNWIESISEGSNRRRHSISGSNSSEEDVVVLNKRRQSNCFDSLECLKEIEKEPVPLPLFVQQSVMEKRPLRIPNPPPRPTSCSITSKTKQENPDQVQVQVQPPPPPPPPPPPMSFASKSNTAMVKRAPQVVELYHSLMKRDSRKDSSNGGLADAPDVADVRSSMIGEIENRSSHLLAIKEDIETQGEFVNSLIREVNNAVYQNIDDVVAFVKWLDDELCFLVDERAVLKHFDWPEKKADTLREASFGYQDLKKLEYEVSSYKDDPRLPCDIALKKMVALSEKMERTVYALLRTRDSLMRNCKEFQIPVEWMLDNGIIGKIKLGSVKLAKKYMKRVAMEVQTKSAFDKDPAMDYMVLQGVRFAFRIHQFAGGFDAETMHAFEELRNLASLLNKT | 762 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vifa3g04730 | 762 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 471 | 578 | - | - | |
| Vifa3g04730 | 762 | MobiDBLite | consensus disorder prediction | 379 | 398 | - | - | |
| Vifa3g04730 | 762 | MobiDBLite | consensus disorder prediction | 436 | 486 | - | - | |
| Vifa3g04730 | 762 | PANTHER | PROTEIN CHUP1, CHLOROPLASTIC | 61 | 754 | IPR040265 | - | |
| Vifa3g04730 | 762 | Coils | Coil | 201 | 235 | - | - | |
| Vifa3g04730 | 762 | Coils | Coil | 124 | 182 | - | - | |
| Vifa3g04730 | 762 | MobiDBLite | consensus disorder prediction | 58 | 84 | - | - | |
| Vifa3g04730 | 762 | MobiDBLite | consensus disorder prediction | 450 | 466 | - | - | |
| Vifa3g04730 | 762 | MobiDBLite | consensus disorder prediction | 382 | 396 | - | - | |
| Vifa3g04730 | 762 | MobiDBLite | consensus disorder prediction | 24 | 43 | - | - | |
| Vifa3g04730 | 762 | MobiDBLite | consensus disorder prediction | 467 | 484 | - | - | |
| Vifa3g04730 | 762 | MobiDBLite | consensus disorder prediction | 1 | 94 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vifa3g04730 | Vifa-Chr3 | 1362483930 | 1362487226 | Dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vifa3g04730 | - | - | mtr:11411533 | 1192.95 |