Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g04726 ATGGCCACTGTGAAACATAAGATATTGGTCTTATCAGGAAAGGGAGGTGTTGGCAAGAGCACATTTTCTGCCCAGCTAGCATTTGCTTTAGCTGCAAGGGATTTTCAAGTTGGTCTTCTTGATATTGACATTTGTGGTCCAAGCATCCCAAAGATGCTTGGTCTAGAAGGTCAAGAGATACACCAGAGCAACCTTGGGTGGTCTCCTGTCTATGTGGAGTCTAATCTTGGGGTCATGTCAATTGGATTCATGCTTCCTCATCCAGATGAAGCTGTTATATGGAGAGGTCCTCGCAAAAATGGGCTTATCAAGCAGTTTTTAAAAGATGTTTATTGGGGTGAACTTGACTTTCTAATTGTAGATGCTCCACCTGGAACATCTGATGAACACATTTCTATTGTCCAATGCCTAGATCCCAATAATGTAGATGGTGCAATCATAGTTACCACTCCTCAACAAGTCTCTCTCATCGATGTGAAAAAAGAAGTGAATTTTTGCAAGAAAGTTGGAGTGAAAGTTCTTGGGGTTGTAGAGAATATGAGTGGCCTGTCCCAGCCTATCTCAAATCTCAAATTTATGAAGATTACAGATAATGGTGAGATGAAAGATGTTACAGAGTGGATATCTGAATACATGAGAGAGAAAGCACCTGAAATGCTGAATCTAATTGCCTGTAGTGAAGTATTTGATAGCAGTGGCGGTGGAGCGTCGAAGATGTGCAAGGAGATGGAGGTACCCTTTCTTGGTAAGGTTCCTTTAGACCCGCAGCTTTGCAAGGCAGCTGAAGAAGGTAGATCATGTTTTGCAGATAAAAATTGCGTTGTGAGTGCTCCAGCGTTACAAAAGATAATAGATAAGCTAATGGAAACTAGTGGGTTGTCAATGACGGTAAGTAATGGAGTGTAG 906 0.4172 MATVKHKILVLSGKGGVGKSTFSAQLAFALAARDFQVGLLDIDICGPSIPKMLGLEGQEIHQSNLGWSPVYVESNLGVMSIGFMLPHPDEAVIWRGPRKNGLIKQFLKDVYWGELDFLIVDAPPGTSDEHISIVQCLDPNNVDGAIIVTTPQQVSLIDVKKEVNFCKKVGVKVLGVVENMSGLSQPISNLKFMKITDNGEMKDVTEWISEYMREKAPEMLNLIACSEVFDSSGGGASKMCKEMEVPFLGKVPLDPQLCKAAEEGRSCFADKNCVVSAPALQKIIDKLMETSGLSMTVSNGV 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g04726 301 Gene3D - 1 296 IPR027417 -
Vifa3g04726 301 ProSitePatterns Mrp family signature. 112 128 IPR000808 GO:0005524
Vifa3g04726 301 PANTHER NUCLEOTIDE-BINDING PROTEIN NBP35 YEAST -RELATED 1 290 IPR019591 GO:0005524|GO:0016226|GO:0051536|GO:0140663
Vifa3g04726 301 Pfam NUBPL iron-transfer P-loop NTPase 225 287 IPR033756 -
Vifa3g04726 301 Pfam NUBPL iron-transfer P-loop NTPase 4 204 IPR033756 -
Vifa3g04726 301 CDD Mrp_NBP35 6 259 IPR019591 GO:0005524|GO:0016226|GO:0051536|GO:0140663
Vifa3g04726 301 Hamap Iron-sulfur cluster carrier protein. 1 288 IPR019591 GO:0005524|GO:0016226|GO:0051536|GO:0140663
Vifa3g04726 301 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 267 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g04726 Vifa-Chr3 1360364497 1360365402 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g04726 - - ahf:112770715 545.043