Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g04714 ATGAAAAAATTTGCAGTACCACTATTACTTATGATGATTTCTTTGCTTGTTTTTGTGATGGTTTCTTTTCTATTAAACAGTAGAAATGGAATTGAAGCATCAACAGATAGTAGCAATATTGATCATGTCAGGTACAAGGTAACTGATGAACAACCTTACAGAACTTCTTATCACTTTCAACCTCCGCAGAATTGGATGAACGCTCCTATGTACTACAAAGGTGTTTATCACTTGTTCTACCAACATAATCCATATGCAGCAACATTTGGTGATAAAATTATTTGGGCTCATTCAGTATCCTACGATCTCGTCAATTGGATTCATCTCAATAATGCTCTTGAACCAAGTGAGCCTTATGACATCAACAGTTGTTGGTCAGGTTCAGCCACTATACTCCCAGGTGGAAAACCTGTTATTCTTTACACCGGAATTGATCACAATAAACATCAAGTTCAAAACTTAGCTATGCCAAAGAATCTATCAGACCCTTTCTTAAGAGAATGGCAAAAACACCCTCAAAATCCTTTGATCACTCCACCTAATGAGGTTGAAAAAGATGAATTCAGAGACCCTACAACTGCTTGGCATGGAAAAGATGGAAAATGGAGAGTAATCATCGGTGCTCAAAAGGGCGACGAAGGAAAAACTATTCTTTACCAGAGTGAGGATTTTGTCAATTGGACAAAGAATCCAAAACCTTTTTTTGCAACAGATAATACTCGAGTTATTGAATGTCCGGATTTTTTTTCCGTGTATATTAATAGTACAAACGGGGTTGATACATCCGTGGAAAATTCAAGTGTTACACATGTTTTGAAGATAGGCTATCAAAGCAATCAACATGACTATTATTTTCTTGGTAAATATGTATCTGATAAGGAAAACTTTGTTCCCGATGAAAAATTTACAGGAACTAGTAAAGATTTACGGTTTGACTATGGTAAATTTTACGCTTCAAAGTCATTTTTTGACTATGCTAAGAATAGGAGAATATTATGGGGATGGGTGAATGAGTCTGACACTACACAAGACGATATTGAGAAAGGATGGGCAGGTTTACAGACAATTCCAAGGAAAGTTTGGCTTGATAAAAGTGGGAAGAGATTAATGCAGTGGCCAATTGAAGAGGTAGAAAGTTTAAGAGACACAAAAATCAGTATTACTGGAAAGAAACTCGAGGGTGGATCAACTCTTGAAGTCTCAGGCATCACTGCATCACAGGTTGATGTAGAAGTGTCGTTTGAGCTACCGGATCTAGAAAGTGGCGAATGGTTAGAAGATCCAAGTCATTTTGATCCCCAACTATTATGTAGCAAACAATATGCATCAAGAAATGGACAAATAGGGCCATTTGGTTTGTTAGCTTTAGCTTCAAAGGATCTCACAGAGCAAACTGCAGTGTCTTTCCAAATATATAAAACTCCTAATAGATATCTGTGTCTGATGTGCAGTGACCAGAGCAGGTCTTCATTGCGGCAAGATCTTGATAAAACCACATATGGTACAATCTTTGACATAGATCCCAATATCAAAGCGATTTCACTAAGAAGCTTGATTGACAAGTCCATTATTGAGAGTTTTGGTGATGGAGGAAGAGCTACCATAACAAGTAGAGTTTATCCATTATTGGCTAGAAAGAAAGATGCACATCTTTATGTATTCAACAACGGAAGCCAAAGTGTGGTTATTTCAAAACTTAATGCTTGGAGCATGAAGCAAGCAGAGATTGGCCATGAGGGAAGTATAAAATGTGCCTAA 1758 0.3726 MKKFAVPLLLMMISLLVFVMVSFLLNSRNGIEASTDSSNIDHVRYKVTDEQPYRTSYHFQPPQNWMNAPMYYKGVYHLFYQHNPYAATFGDKIIWAHSVSYDLVNWIHLNNALEPSEPYDINSCWSGSATILPGGKPVILYTGIDHNKHQVQNLAMPKNLSDPFLREWQKHPQNPLITPPNEVEKDEFRDPTTAWHGKDGKWRVIIGAQKGDEGKTILYQSEDFVNWTKNPKPFFATDNTRVIECPDFFSVYINSTNGVDTSVENSSVTHVLKIGYQSNQHDYYFLGKYVSDKENFVPDEKFTGTSKDLRFDYGKFYASKSFFDYAKNRRILWGWVNESDTTQDDIEKGWAGLQTIPRKVWLDKSGKRLMQWPIEEVESLRDTKISITGKKLEGGSTLEVSGITASQVDVEVSFELPDLESGEWLEDPSHFDPQLLCSKQYASRNGQIGPFGLLALASKDLTEQTAVSFQIYKTPNRYLCLMCSDQSRSSLRQDLDKTTYGTIFDIDPNIKAISLRSLIDKSIIESFGDGGRATITSRVYPLLARKKDAHLYVFNNGSQSVVISKLNAWSMKQAEIGHEGSIKCA 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g04714 585 SUPERFAMILY Arabinanase/levansucrase/invertase 50 374 IPR023296 -
Vifa3g04714 585 CDD GH32_Fruct1-like 64 362 - -
Vifa3g04714 585 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 21 576 - -
Vifa3g04714 585 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 385 571 - -
Vifa3g04714 585 Pfam Glycosyl hydrolases family 32 C terminal 376 570 IPR013189 -
Vifa3g04714 585 SMART glyco_32 58 531 IPR001362 GO:0004553|GO:0005975
Vifa3g04714 585 Gene3D - 385 571 - -
Vifa3g04714 585 Gene3D Glycosyl hydrolase domain; family 43 62 384 IPR023296 -
Vifa3g04714 585 Pfam Glycosyl hydrolases family 32 N-terminal domain 58 373 IPR013148 -
Vifa3g04714 585 SUPERFAMILY Concanavalin A-like lectins/glucanases 373 573 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g04714 Vifa-Chr3 1356751449 1356754921 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g04714 67 576 Glycoside Hydrolase AT1G55120 56.346 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g04714 - K01193 gmx:100777487 899.042