Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g04706 ATGGAGGAAGCATACCCCAGAAGCAGAAAGTTCAATAGGGTATGTGTGTTCTGCGGCAGCAACTCCGGCAACCGTCAAGTTTTCAGTGACGCCGCCATTGAATTAGCCGATGAACTGGTTAAGAGGAAGATAGATTTGGTGTATGGTGGAGGAAGTGTTGGACTGATGGGGTTGATATCTCAGAAAATGTATAATGGTGGCTGCAATGTTCTAGGGGTTATTCCAAAAGCTCTCATGCCTCATGAGATATCTGGCGAAACAGTTGGTGAAGTAAGAATTGTTTCCGATATGCATGAGCGGAAAGCTGCGATGGCTCAAGAAGCTGATGCTTTTATTGCACTCCCTGGAGGATACGGAACTATGGAAGAGCTTCTGGAGATGATAACTTGGGCACAACTTGGAATTCATAAAAAACCGGTTGGCCTACTCAATGTTGATGGTTACTATAACTTTTTGCTTGCACTATTTGACAATGGTGTTGAAGAAGGCTTCATTAAGCCCTGTGCTCGGAATATAGTCGTCTCAGCTTCATCCGCCAAAGAACTTATGATGGAGATGGAGAGCTACTCTCCTTCCCATGAGCATGTAGCCCCTCATGAGAGCTGGCAGATGAAGCAATTAGGTAATTATCCAGGACAAGAAAATGCAGAATGA 654 0.4465 MEEAYPRSRKFNRVCVFCGSNSGNRQVFSDAAIELADELVKRKIDLVYGGGSVGLMGLISQKMYNGGCNVLGVIPKALMPHEISGETVGEVRIVSDMHERKAAMAQEADAFIALPGGYGTMEELLEMITWAQLGIHKKPVGLLNVDGYYNFLLALFDNGVEEGFIKPCARNIVVSASSAKELMMEMESYSPSHEHVAPHESWQMKQLGNYPGQENAE 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g04706 217 NCBIfam Rossman fold protein, TIGR00730 family 13 189 IPR005269 GO:0009691|GO:0016787
Vifa3g04706 217 Gene3D - 11 205 - -
Vifa3g04706 217 SUPERFAMILY MCP/YpsA-like 10 189 - -
Vifa3g04706 217 FunFam Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG8 11 205 - -
Vifa3g04706 217 Pfam Possible lysine decarboxylase 56 186 IPR031100 -
Vifa3g04706 217 PANTHER LOG FAMILY PROTEIN YJL055W 7 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g04706 Vifa-Chr3 1352699422 1352701404 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g04706 K22522 - gmx:100785484 387.111