Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g04689 ATGAAGAACGATTGGTTACCATGGATGGATTCAGATCCAGACCTATTCCCATTAGAACCATTCTTCAACAATTTTCTACAATCCTTCATACAAAACTCTAGAACTTTCTACGTTCCAGGCGCTTCGGCAATCGAAGAGACCTTTGGCCGCGTAACCAAATTCGCCGGCGCGTTGTTGTTTTGGGTTTCCGGCGGTGGATCCACCGCGTGCGGCGGTTCAATTCGATCTGGAGGCGGTTCTGGTAATGTGAATATGAATATGAAGGTTAAGCCTGTTATTGGTAATAATGTGGCTGGGTTTGGGGTTCCTTTTGGTTTTAAATCCAAGAGAAAGTCTTCTGAACGTGTGAGTTTGGGGAAGGTTTCGAGTTTTGTGGTTAGGTTGTTCTGGAGAGAAGCTAAAAGGATTCAATCGTATCCTGTTTTGTCTATTGCTGCAGCATTGGTGCCGCCAATTCAAAACTTGTCATCAAATCTACTGTCTGGGCCAATGCAGGATCCTGATATGCAAATGCATGAAAGCATGGACCAAGTGCCTAAGGATGTTGAACGCCAAAGATGTCCTCGCCTATCAATTTCTGAGTTGAATCTAGCAAATTCTGCTGTGGAGGCCAAAACTGGCATTGAATTTCCTATGGTTCTGGATAATTTATCAGCTGGGGAGCAGAATTCCCGCTCTGACTCAGAGGTCCTGGTTGGAACGGGTTCTAGAACCATGACAATTGTTAAAATCAAGTCGCTTAAGATCTATGCTTTTGGATTTTATGTTCACCCGAACTCCCTCTGTGAGAAGTTGGGCCCAAAATATGCATCAATTTCTGCAGATGAACTGAATGACCATAATGATTTCTACCAAGATCTTCTCAGGGAAGATATCAGTATGACTGTTAGGCTTGTCGTAAATTGCAAAGGGATGAAAATTAACAGTGTGAAAAATGCTTTTGAGAAATCACTTAGAGCTCGACTAGCTAAGACAAATCCTTCCGCAGACTTTGATTGCCTTTGGACATTTGGTTCATACTTTACGGAGAATATCCCAATACCTTTGGGAACAGTAATTGAGTTTAAACGAACAGTTGACGGGCATCTGATTACTGAAATTGGTGGTAGTTACGTTGGAAGTGTCCACAGCAAAGATATGTGTCGGGCTTTCTTTGACATGTACATTGGAGATCTCCCTGTGTGCGAACAAACCAAGAAAGAGATTGGCACGAACATCGCAAATATTATTAGGAGTTGTTGA 1242 0.4267 MKNDWLPWMDSDPDLFPLEPFFNNFLQSFIQNSRTFYVPGASAIEETFGRVTKFAGALLFWVSGGGSTACGGSIRSGGGSGNVNMNMKVKPVIGNNVAGFGVPFGFKSKRKSSERVSLGKVSSFVVRLFWREAKRIQSYPVLSIAAALVPPIQNLSSNLLSGPMQDPDMQMHESMDQVPKDVERQRCPRLSISELNLANSAVEAKTGIEFPMVLDNLSAGEQNSRSDSEVLVGTGSRTMTIVKIKSLKIYAFGFYVHPNSLCEKLGPKYASISADELNDHNDFYQDLLREDISMTVRLVVNCKGMKINSVKNAFEKSLRARLAKTNPSADFDCLWTFGSYFTENIPIPLGTVIEFKRTVDGHLITEIGGSYVGSVHSKDMCRAFFDMYIGDLPVCEQTKKEIGTNIANIIRSC 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g04689 413 PANTHER FATTY-ACID-BINDING PROTEIN 2 24 411 - -
Vifa3g04689 413 Pfam Chalcone isomerase like 230 402 IPR016087 -
Vifa3g04689 413 Gene3D - 202 388 IPR016088 -
Vifa3g04689 413 Gene3D - 260 403 IPR016089 -
Vifa3g04689 413 SUPERFAMILY Chalcone isomerase 203 410 IPR036298 GO:0016872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g04689 Vifa-Chr3 1347030448 1347037871 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g04689 - - gmx:100803025 521.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g04689 3 1347030448 1347037871 Vifa3g04689 3 1347030448 1347037871 ECH