Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g04679 ATGAATCTTTGGTGTTGTCTATGCTTCAACCAAAAGGAAAAAGAAGAAGAAGAGGAAAGCTGTGATTTCGTTGAACCTATGAACAACGACGAGGACAACTTCGGAAACGTTTTTGATGAGGAAGAAGGTGAAGACGTGAATTTCGACGCCGGATTTGTTCAGTATGGGAGAGATGCATTTGGTTCGTGGCAAGTTACACAAGGAGAAGGAGAAAGTAGTTCAGTAAACGCCGCTGTTGCTCCGGGGAGTCCTGTCGCTGATGAGAGCCGCGATTCGTCTCACAAGCGCGCTAAGTTCTATAATGAGTGTAACTTTGATGACCCAACATCGTCTAGTAAAGTGAAATATTCTATGGATTATGGAGATTTCGATGCGTCTCTCCGACCTAGTCATGTCACCTGTTATGGAGATTTTGCGTTGGTGTGTACTGGTGAGGATGATAATGGTGTGGAAGACAGGGAAGGGAATGATAGTGACAGTTCACAATTAGAAGAACAAGAGGTTGTCAGGATGGATCTTACGGATGACCTGTTGCATATGGTTTTCTCATTTCTGGATCAGACAAATCTCTGCAGAGCTGCCAGAGTTTGTAAGCAGTGGCGAGCTGCTAGTACTCATGAAGATTTCTGGAAGAATTTGAATTTTGAAAATCGGGACATATCTGAAGAACAATTTGAGGACATGTGTAGGCGTTATCCGAATGCTACAGCATTGAGCATATCAGGACCTTCTATTTATTTGCTGGTCATGAAGGCTATATCTTTGTTAAGGAATCTTGAGGTTTTGACATTAGGAAGAGGACAGATAGGGGATGCTTTTTTTCTTGCTCTACCTGATTGTTCTATGTTGAGAAAATTGAATATCAATGACTCTACACTTGGCAATAGTATTCAGGAGATATCTGTCGTTCATGAGAGACTGTGTCATCTTGAGTTAACAAAATGTCGTGTTATGCGAATACAAGTCAGGTGCCCACAACTTAAAACTATGTCCTTGAAGCGCAGTAACATGGCCCAAGTTGTTCTTAATTGTCCTCTGTTGCATGAACTTGATATAGGCTCTTGCCACAAACTTCCTGATGCTGCTATTCGTGCGGCTGCAACTTCATGTCCTCAATTAGTGTCTCTGGACATGCGTAATTGTTCTTGTGTCAGCGATGAAACACTCCGTGAAATAGCACAACATTGTCCTAATCTTGGTTTTCTTGATGCATCGTATTGCCCAAACATATCTTTGGAGTCTGTTCGACTCCCAATGTTGACAATTCTAAGGCTTCATAGCTGCGAGGGCATCACTTCTGCATCAATGGCTGCAATAGCTCATAGTTCTATGTTGGAGGTTTTGGAGCTTGACAATTGCAGTCTATTGACTTCAGTGTCGTTGGATCTTCCACGTTTGCAAAATATTAGATTGGTGTACTGTCGCAAATTAGCAGATTTAAACTTGAGGGCTATATCGCTTTCTTCTATACAAGTGTCTAACTGCTCTGTACTCCATCGGATCAATATCACTTCAAATTCACTTCAAAAATTAGCATTGCAAAAGCAGGATAGCTTAACTACATTAGCACTGCTATGCCAATCTTTACAAGAAGTGGACCTCTCTGAGTGTGAATCCTTGACAAACTCTATCTGTGATGTTTTTAGTAATGACGGTGGATGTCCTATGTTGAAATCACTAGTTCTTGATAATTGTGAGAGCTTGACTTCAGTTCGCTTCAACAGCACCTCATTAATCAGTCTTTCTCTTGGTGGTTGCCGAGCAATTACTACTCTTGAGCTAACCTGCCCTAATCTTGAGAAGGTCATCTTGGATGGTTGTGATCATTTGGAAAATGCATCATTTTGCCCTGTTGGTCTTCGATCTCTCAATTTAGGAATATGCCCAAAGCTAAACATACTCTGCATTGAAGCGATGCTAATGGTCTCGCTAGAGTTGAAAGGATGTGGCGTTCTGTCTGAAGCATCCCTTAATTGTCCTCTCTTGACATCTCTTGATGCTTCCTTTTGCAGTCAACTCACTGATGATTGCTTGTCTGCAACAACCCGTGCATGTCCACTAATTGAGTCATTAATATTGATGTCATGCCCGTCGATCGGGTTAGAGGGACTTTGTTCCCTGCACTGGCTCCCAAATTTAGCTCTTCTTGACTTATCATACACTTTCTTGGTGAACCTGCAGCCTGTTTTTGACTCTTGTTCACAGCTAAAGGTGTTAAAGTTACAGGCATGCAAATATCTCACTGACTCATCACTTGAACCTCTTTACAAAGGGGGTGCTTTACCAGCTCTTCAGGAGTTGGACTTGTCTTATGGAACTTTGTGTCAGAAAGCCATAGAAGAGCTTCTTTCTTGCTGCACTCACCTTACACGTGTGAGTTTGAATGGATGTAAGAATATGCATGATTTAAACTGGGGGTACAGTCAAGAGAAGTTTCCTGAGTTACCTGGCGAGGTTGACGTAGCTTGTCTCAACCTATGCTGGCTTAATTTAAGCCACTGTTCCTCATTGGAAGTTTTGAAGCTAGAGTGTCCAAGATTGACCAATCTATTCCTTCAGTCGTGCAACATTGACGAGGGAGCTGTTGAGGCTGCTATTTCAAAGTGCACTTTGTTGGAGACTCTTGATGTTCGCTTTTGTCCTAAGATAAGCTCAACGAGCATGGTAAGATTTCGTGCTGCATGTCCTGGTTTGAAGCGTATATACAGCAGCCTGTCAACTTCAACATGA 2730 0.422 MNLWCCLCFNQKEKEEEEESCDFVEPMNNDEDNFGNVFDEEEGEDVNFDAGFVQYGRDAFGSWQVTQGEGESSSVNAAVAPGSPVADESRDSSHKRAKFYNECNFDDPTSSSKVKYSMDYGDFDASLRPSHVTCYGDFALVCTGEDDNGVEDREGNDSDSSQLEEQEVVRMDLTDDLLHMVFSFLDQTNLCRAARVCKQWRAASTHEDFWKNLNFENRDISEEQFEDMCRRYPNATALSISGPSIYLLVMKAISLLRNLEVLTLGRGQIGDAFFLALPDCSMLRKLNINDSTLGNSIQEISVVHERLCHLELTKCRVMRIQVRCPQLKTMSLKRSNMAQVVLNCPLLHELDIGSCHKLPDAAIRAAATSCPQLVSLDMRNCSCVSDETLREIAQHCPNLGFLDASYCPNISLESVRLPMLTILRLHSCEGITSASMAAIAHSSMLEVLELDNCSLLTSVSLDLPRLQNIRLVYCRKLADLNLRAISLSSIQVSNCSVLHRINITSNSLQKLALQKQDSLTTLALLCQSLQEVDLSECESLTNSICDVFSNDGGCPMLKSLVLDNCESLTSVRFNSTSLISLSLGGCRAITTLELTCPNLEKVILDGCDHLENASFCPVGLRSLNLGICPKLNILCIEAMLMVSLELKGCGVLSEASLNCPLLTSLDASFCSQLTDDCLSATTRACPLIESLILMSCPSIGLEGLCSLHWLPNLALLDLSYTFLVNLQPVFDSCSQLKVLKLQACKYLTDSSLEPLYKGGALPALQELDLSYGTLCQKAIEELLSCCTHLTRVSLNGCKNMHDLNWGYSQEKFPELPGEVDVACLNLCWLNLSHCSSLEVLKLECPRLTNLFLQSCNIDEGAVEAAISKCTLLETLDVRFCPKISSTSMVRFRAACPGLKRIYSSLSTST 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g04679 909 Gene3D Ribonuclease Inhibitor 819 908 IPR032675 -
Vifa3g04679 909 CDD F-box_FBXO41 166 214 - -
Vifa3g04679 909 Gene3D Ribonuclease Inhibitor 414 487 IPR032675 -
Vifa3g04679 909 Gene3D Ribonuclease Inhibitor 727 816 IPR032675 -
Vifa3g04679 909 Gene3D Ribonuclease Inhibitor 640 726 IPR032675 -
Vifa3g04679 909 MobiDBLite consensus disorder prediction 66 93 - -
Vifa3g04679 909 SMART fbox_2 173 213 IPR001810 GO:0005515
Vifa3g04679 909 SUPERFAMILY RNI-like 417 639 - -
Vifa3g04679 909 Gene3D Ribonuclease Inhibitor 315 413 IPR032675 -
Vifa3g04679 909 SUPERFAMILY F-box domain 172 203 IPR036047 GO:0005515
Vifa3g04679 909 SUPERFAMILY RNI-like 193 459 - -
Vifa3g04679 909 PANTHER OS10G0396666 PROTEIN 157 908 - -
Vifa3g04679 909 SMART LRR_CC_2 370 395 IPR006553 -
Vifa3g04679 909 SMART LRR_CC_2 869 894 IPR006553 -
Vifa3g04679 909 SMART LRR_CC_2 786 827 IPR006553 -
Vifa3g04679 909 SMART LRR_CC_2 844 868 IPR006553 -
Vifa3g04679 909 SMART LRR_CC_2 733 758 IPR006553 -
Vifa3g04679 909 SMART LRR_CC_2 659 684 IPR006553 -
Vifa3g04679 909 SMART LRR_CC_2 417 442 IPR006553 -
Vifa3g04679 909 SMART LRR_CC_2 463 488 IPR006553 -
Vifa3g04679 909 SMART LRR_CC_2 526 550 IPR006553 -
Vifa3g04679 909 SMART LRR_CC_2 596 621 IPR006553 -
Vifa3g04679 909 SMART LRR_CC_2 554 584 IPR006553 -
Vifa3g04679 909 SMART LRR_CC_2 344 369 IPR006553 -
Vifa3g04679 909 SMART LRR_CC_2 685 710 IPR006553 -
Vifa3g04679 909 Gene3D Ribonuclease Inhibitor 488 639 IPR032675 -
Vifa3g04679 909 ProSiteProfiles F-box domain profile. 167 213 IPR001810 GO:0005515
Vifa3g04679 909 FunFam F-box/LRR-repeat protein 15 165 414 - -
Vifa3g04679 909 Gene3D - 167 213 - -
Vifa3g04679 909 Pfam F-box-like 175 215 IPR001810 GO:0005515
Vifa3g04679 909 SUPERFAMILY RNI-like 647 902 - -
Vifa3g04679 909 FunFam F-box/LRR-repeat protein 15 726 811 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g04679 - - gmx:100817100 1324.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g04679 3 1342759410 1342766520 Vifa3g04679 3 1342759410 1342766520 ECH