Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g04649 ATGGATAAACAACCTTCCACCATCGACCCTTTCCTTCTCGATTATCAACCTTCCGAACTCCGAATCGCTTCCGAATTCTTCTCCACATGGCTTCCTTTTCTCTCCAAAGATCTCTGCCGCCGCTGCTCTCAATCACTCTCCGATCGCATCCGTTCAATTGACCCTGAGTCTGAAAATGAAAACCGGGACAAGAATTCGGAAGAGGTTAATTTAGATGAAAATTGTGATTGTCATTCTCTTGGGAGCTGGAATGATGGTGTGCAGGGGAATTCGGCTTCGGAAGCTCCGAGTCCGCGGGTGTTGTGGGCTGATATGGCTGATGAGTTTGGTGAAGATGAGATTGATCGAAACGACGATGTTGGTGGTGTTGTTTTGGGAGAGAATTCGGGTGAAAATAGAGTTGTTGTTTCTGATAAGGCTGTTTTGCCTAGGGAACAAAGAGAGTATATTAGGTTTATGAATTATGTGAGGCGCAAGAAAGATTTTATTTGTATGGAAAGGATAAATGGAAAACTAGTCAACATTGTTGAAGGTCTTGAGTTGCATACTGGTATTTTTAGTGCTGCTGAACAGAAGAGGATTGTTGAATATGTTGCTTCTTTGCAAGAGATGGGAAGAAAGGGAGAGCTCAAAGAACGGACATATTCAGCTCCTAAAAAGTGGATGAAGGGCAAGGGACGCCAAACTATTCAATTTGGGTGCTGTTACAATTATGCAGATAAGGATGGTAACCCACCAGGTATTCTTCACCAGGCATCTATAGATCCTTTACCCGATCTTTTCAAGGTCATCATTCGACGCTTGGTCAAGTGGCATGTACTCCCTACAACATGTGTGCCAGATAGTTGTATAGTGAATGTCTATGAAGAAGGGGACTGCATACCTCCGCACATAGATAACCACGATTTTGTTCGACCATTTTGCACTGTCTCGTTTCTTAGCGAGTGCGACATACTTTTTGGATCAAACCTTAGGATTGTAGGTCCTGGTGAATTTGATGGTTTGTTTGCTATTCCTCTACCAGTAGGATCTGTACTTGTCTTAAATGGAAATGGAGCTGATGTAGCTAAGCATTGTGTCCCCGCAGTTCCTTCAAAAAGGATATCAATCACATTTAGAAGAATGGATGAGTCCAAGCGACCTGCCGGGTACGTCCCAGAACCTGATCTTCAGGGGATCCAACCATTGGCCTATGAAGCTGAGCAGCAAGAAATTAACAAATCAAGTGGTGGACACAACAGATCTAATAATCGTCAAACGTATAGAAATAATGACAGAAGAGGTGGCAGAATTGACGGAATGGGATCTACACCTAGAAACGACAGATTCTCAGAGCCTCGCGAATGGTCTCAAAATTCACAAAGATCTGCACCAACTAGAAACAGTAGATATTCAGAGCCTCGCGAATGGAGTCAAAATTCACAAAGATCTGCGACTAGAAACGATAGATACTCAGAGCCTTCAGAGCCTCGTGAGTGGAGTCAAAATTCACAAAGATCTGCAGCTAGAAACGATAGATACTCAGAGCCTCGCCAGTCACCTCAAAGTTCACAAAGATCTGCAAATAGGTGGAGTAGGGTAAAGCCAACTAATTAA 1596 0.4336 MDKQPSTIDPFLLDYQPSELRIASEFFSTWLPFLSKDLCRRCSQSLSDRIRSIDPESENENRDKNSEEVNLDENCDCHSLGSWNDGVQGNSASEAPSPRVLWADMADEFGEDEIDRNDDVGGVVLGENSGENRVVVSDKAVLPREQREYIRFMNYVRRKKDFICMERINGKLVNIVEGLELHTGIFSAAEQKRIVEYVASLQEMGRKGELKERTYSAPKKWMKGKGRQTIQFGCCYNYADKDGNPPGILHQASIDPLPDLFKVIIRRLVKWHVLPTTCVPDSCIVNVYEEGDCIPPHIDNHDFVRPFCTVSFLSECDILFGSNLRIVGPGEFDGLFAIPLPVGSVLVLNGNGADVAKHCVPAVPSKRISITFRRMDESKRPAGYVPEPDLQGIQPLAYEAEQQEINKSSGGHNRSNNRQTYRNNDRRGGRIDGMGSTPRNDRFSEPREWSQNSQRSAPTRNSRYSEPREWSQNSQRSATRNDRYSEPSEPREWSQNSQRSAARNDRYSEPRQSPQSSQRSANRWSRVKPTN 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g04649 531 MobiDBLite consensus disorder prediction 449 481 - -
Vifa3g04649 531 MobiDBLite consensus disorder prediction 490 531 - -
Vifa3g04649 531 MobiDBLite consensus disorder prediction 405 531 - -
Vifa3g04649 531 Gene3D - 162 380 IPR037151 -
Vifa3g04649 531 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 279 376 IPR005123 -
Vifa3g04649 531 SUPERFAMILY Clavaminate synthase-like 175 375 - -
Vifa3g04649 531 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 21 517 IPR044842 GO:0003729|GO:0006402|GO:0032451
Vifa3g04649 531 Pfam 2OG-Fe(II) oxygenase superfamily 179 373 IPR027450 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g04649 Vifa-Chr3 1332473031 1332475978 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g04649 K10767 - gmx:100787321 705.286