Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g04598 ATGACAACTCACCAAGATCAAACAACAACAATAACAAAAACATCAACAAACAGAACCAAAAACCCATTCATATCAATCCTAAGCCAACCAATAGAATGGTTAACAATGCTAACACACAATCTCAACCCATCTTTCATAGCAGGAATTTTCCTAATCTACGGCATAGGCCAAGGCTTCTCCGGTTCATTCTTCAAACTCGTTTCAGATTATTACTGGAAAGACATTCAAAAAATCCAACCTTCAACCGTTCAACTCTACGTTGGCATTTACTTCATTCCATGGATTCTCAAACCCGTTTGGGGGATTCTCACCGACGCTTTTCCGTTACTGGGTTACCGTCGCCGGCCGTATTTTATCCTCGCCGGAGTTCTTGGATTCGTGTCTGCTTCTGTGGTTGCGGTGACAGGAAGCCTTGCTCCTGTCGCGGCGTTGATGTGTTTTCTTGGTGTTTCTGCTAGTCTTGCTATTGCGGATGTTACTATTGATGCTTGTATTGCAAGGAATAGTATTGAGGTTCCGGGTTTGGCTCCTGATTTGCAGAGCTTGTGTGGATTTTGTTCGGGTTCTGGGGCTCTTCTTGGGTACCTTGTTAGTGGATTCTTTGTTCATCATCTTGGTCCACAGGGGTCACTTGGTCTTATGGCAATTTTTCCTGCTTTGACTATTGTACTGGGTTTTGTGATCTATGAAAAAAAAGCCACTGGCTTGCATAATGAAAAGAAGCAGGGAGCAATGGAGAATGTAGGAATGACAATTAGAAGCATGTTCAAAACAATAAAGTATCCTCAAGCATGGAAGCCTTCTCTTTATATGTTCCTTTCCCTTTCTCTTAATGTAACCACTCATGAAGGTCATTTTTACTGGTATACTGATTCAAAAGCCGGTCCTGCATTCTCTCAGGAGTTTGTTGGGGTAATCTATGCAATTGGAGCAGTGGCTTCAATAATAGGTGTTCTAATCTACCACAAGTATCTAAAAAACTACACATTTAGAAACCTAGTATTCTATGCACAACTCCTATATGCAGTATCAGGTGTATTGGACTTGATCTTCGTTCTACGTTGGAATTTGAAAATTGGAATCCCTGACTACTTTTTTGTTGTCATCGAAGAAACCACTGTTAGAATCACAGGCAAAATAAGGTGGATGCCAATGATGGTACTGAGCGCAAAACTATGTCCTCTAGGAATTGAAGGAACATTTTTTGCTCTTTTAATGTGTATTGATAGCATTGGTATGCTTATATCCAAATGGGGCGGAGGGTTACTTCTACGTGTCCTTCATATTACCAGAAGTGATTTTAACAACTTATGGTTGGCTGTTCTTATAAGGGACATTCTTAGATTTGTTACACTTGTTTTGGTTTTTCTTGTTCCTAATGTAGGACCTTATGAAGGATTGCTTCCTTCTGATGGTTGTGAAATGGATAAGAGAAATGGTAATGTTGATGAAGAGACCTTGGAGCTTGTTCCTATCAATGCCAAAGTTGAAGTTTAG 1497 0.4028 MTTHQDQTTTITKTSTNRTKNPFISILSQPIEWLTMLTHNLNPSFIAGIFLIYGIGQGFSGSFFKLVSDYYWKDIQKIQPSTVQLYVGIYFIPWILKPVWGILTDAFPLLGYRRRPYFILAGVLGFVSASVVAVTGSLAPVAALMCFLGVSASLAIADVTIDACIARNSIEVPGLAPDLQSLCGFCSGSGALLGYLVSGFFVHHLGPQGSLGLMAIFPALTIVLGFVIYEKKATGLHNEKKQGAMENVGMTIRSMFKTIKYPQAWKPSLYMFLSLSLNVTTHEGHFYWYTDSKAGPAFSQEFVGVIYAIGAVASIIGVLIYHKYLKNYTFRNLVFYAQLLYAVSGVLDLIFVLRWNLKIGIPDYFFVVIEETTVRITGKIRWMPMMVLSAKLCPLGIEGTFFALLMCIDSIGMLISKWGGGLLLRVLHITRSDFNNLWLAVLIRDILRFVTLVLVFLVPNVGPYEGLLPSDGCEMDKRNGNVDEETLELVPINAKVEV 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g04598 498 Pfam BT1 family 269 460 IPR039309 -
Vifa3g04598 498 Pfam BT1 family 57 232 IPR039309 -
Vifa3g04598 498 CDD MFS_FBT 48 456 - -
Vifa3g04598 498 NCBIfam folate/biopterin family MFS transporter 36 463 IPR004324 GO:0016020
Vifa3g04598 498 Gene3D MFS general substrate transporter like domains 23 457 IPR036259 -
Vifa3g04598 498 PANTHER FOLATE-BIOPTERIN TRANSPORTER 1, CHLOROPLASTIC 29 478 IPR039309 -
Vifa3g04598 498 SUPERFAMILY MFS general substrate transporter 49 459 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g04598 Vifa-Chr3 1317289181 1317291632 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g04598 - - gmx:100806186 748.429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g04598 3 1317289181 1317291632 Vifa3g04598 3 1317289181 1317291632 ECH