Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g04595 ATGCAGGAAGATTCAGTTTCTGAATCTGATGAACAGAATGAAGGAAAAAAGTCAAAGAGTTATTGGATTTGGAAGTGTTTTTACATTCCAATTCATTGGTTTAAAATGCTTTCAAGGGAAATGCATTGGAGTTTTGTGTTAGGAGTTGTTGTTGTTTATGGAATAAGTCAAGGTGTTGGTGGAGCTCTTGCTGGTGTTGGAACAAAGTATTATATGAAAGATGTTCAGAAAGTTCAACCTTCTGAAGCACAGGTTTATGCTGGAATTACTTCTATTCCTTGGATTGTTAAACCCTTATGGGGTCTTCTTACTGATGTTGTGCCTATATTGGGATACAGGAGAAGACCTTATTTCATTTTTGCTGGTTTATTAGGAGCAACTGCCATGCTTTTATTATCTTTTCATGAAAACCTACATCTGGTATTAGCACTTTTAGCATTAACAGCAGGGAGTGCTGGGGTGGCAATAGCCGACGTGACCATTGATGCTTGTGTTGCACATAACAGTATCTCTCATCCTTCCCTTGCCGCCGACATGCAAAGTTTATGTGCCTTTAGTTCTTCTGTTGGAGCGCTATTAGGATTCTCCGTCAGTGGCATCTTCGTTCACCTTATAGGCCCTATGGGAGTATTTGGTTTGTTGACTATTCCGGCTGGACTTGTCATTTTGGTTGGATTTCTGCTTGACGAGCCTCGTATGCAAAATTTCTCTTACAGACAGGTGAACCAAAATTTTGTGGATGCTAGCAAGGCGATGTGGACTACATTGAAGAGTGAAAATGTATGGAGGCCTTGTTTATACATGTATTTATCCCTTGCACTGAGTTTGAATATCCTCGAAGGAATGTTTTATTGGTATACGGACTCGAAGGATGGACCATCTTTCTCTCAGGAGAGTATAGGTTTCATTTTTTCAATCAGTTCCGTCGGTTCCCTTTTAGGCGCAATACTATACCAATATGCGCTAAAGGATTACGCATTCAGAGACTTACTCTTTTGGACTCAGTTACTCTATGGTCTATCAGGGATGTTTGATCTGATTATTGTCTTGAGATTGAACCTAAAATTCGGTATTCCGGATTACGTCTTCGTCGTTTTCGTCGAAAGCATAGGTCAGATGACTATTAGACTAAAATGGATGCCGATGCTTGTACTCAGCTCAAAGCTTTGTCCTTCTGGTATCGAAGGAACATTCTTTGCTCTATTAATGTCGATTGATAACGTCGGACTTCTCTCGTCGTCATGGGCCGGAGGATTTGTACTTCATGTTCTAAAGATCACAAGAACAAAGTTCGATAATATTTGGTTGGCGATTTTGATTCGGAATATTTTAAGAATCACTCCACTTTGTATGCTGTTTTTGGTGCCTAGAGTTGATCCTAACTCTTTTGTTCTTCTTCCAAAAGAAAGTGTGGATTCAAAGGTGGATATTGATGCTTCAGAAACAAAACATGTTGAATTGATTTCCCTTGTACACAGTGTTGATGATAATATGTAA 1497 0.3941 MQEDSVSESDEQNEGKKSKSYWIWKCFYIPIHWFKMLSREMHWSFVLGVVVVYGISQGVGGALAGVGTKYYMKDVQKVQPSEAQVYAGITSIPWIVKPLWGLLTDVVPILGYRRRPYFIFAGLLGATAMLLLSFHENLHLVLALLALTAGSAGVAIADVTIDACVAHNSISHPSLAADMQSLCAFSSSVGALLGFSVSGIFVHLIGPMGVFGLLTIPAGLVILVGFLLDEPRMQNFSYRQVNQNFVDASKAMWTTLKSENVWRPCLYMYLSLALSLNILEGMFYWYTDSKDGPSFSQESIGFIFSISSVGSLLGAILYQYALKDYAFRDLLFWTQLLYGLSGMFDLIIVLRLNLKFGIPDYVFVVFVESIGQMTIRLKWMPMLVLSSKLCPSGIEGTFFALLMSIDNVGLLSSSWAGGFVLHVLKITRTKFDNIWLAILIRNILRITPLCMLFLVPRVDPNSFVLLPKESVDSKVDIDASETKHVELISLVHSVDDNM 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g04595 498 Gene3D MFS general substrate transporter like domains 34 442 IPR036259 -
Vifa3g04595 498 Pfam BT1 family 57 224 IPR039309 -
Vifa3g04595 498 Pfam BT1 family 267 457 IPR039309 -
Vifa3g04595 498 NCBIfam folate/biopterin family MFS transporter 34 460 IPR004324 GO:0016020
Vifa3g04595 498 PANTHER FOLATE-BIOPTERIN TRANSPORTER 1, CHLOROPLASTIC 31 473 IPR039309 -
Vifa3g04595 498 SUPERFAMILY MFS general substrate transporter 46 451 IPR036259 -
Vifa3g04595 498 CDD MFS_FBT 48 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g04595 Vifa-Chr3 1317183297 1317185621 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g04595 - - ccaj:109816000 800.816