Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g04512 ATGGCTACCTTGGTAAATATTATCTGCAAAAGAACTGTGGTGAGCACAAAGGCAATTCAACCAGGAAAGTACTTACCCTTATCAATTCTGGATCGTTTCATGGAGAAAAACCATATTAGAATGGTATACTATTACCAAACTTCAGAAGAATTGGAGCTTGGAAAATTGACCAAGAACTTGAGAGAGTCTTTGTCAGAAATGCTTTCTCATTTCCCTGTAGTGACAGGAAGGTTGTTAAAAGATGATATGGGACATTGGAAGATCAAATGCAACGATGCTGGTGTTAGAATGGTTGAGGCAAAAGCTAAAGGTAGTGTAGAAGAGTGGCTAAGAAATGTGGATAGAGAAAAGGAACTTAAACTTGTTTATTGGGAAGATATGCATCAAAAGCCTTACTATTGGTCCACTTTTTATGTTCAGCTAACTGAATTCGAAGAAGGTGGATTAGCAATTGGCTTAAGTTGCACTCATCTCTTGGCAGATTCCATTTGTGCAACAAATTTCATGAAGGTTTGGGCTGACATTTCATTAGGCAACAAATTGATTTCACCTCCAATATTCCACCCTTTACCTTCTCCAAAACCGCAAAACAAAAAGCCCAATAATAACTCATATATGGGCTTAATATCTCACTATAAGTCCTCAATTGAGAAGCCCCTTTTTATCAAGGAATCAAAGTACACCACCATTTCCATGGGCTTCTCTCACTACATGGTTCAGGCTTGCATGTCTATGGCCCAAATCAATGGCTCATCAAGCCCAAGCCCAAAATCAACACCATTTGAAGCCCTAGCCGGGTTGTTTTGGGTTGCCTTAAGCAAAATCAAAGGAATACAAAATGGGCTTGTTGACATGTCCATATATTTGAATGTAAGAAAAATCATGGGCTTAGATGAAGGATTCTTTGGAAACTCCATGCTATATAATAAGGTGCAATTAGAAGAAAATTTCAATTTAGATTTATATGAGAATAAATTTCCACAAGCTACTAAGGCCATAAGAGATGCTGTGGCTAACATTAACAATGAGGAAATAATGGATTTAATTGAGTGGTTTGAAAATAATGATATAAATTCATCTACAATGATGATAGGTCATGATTTGGTTTTTACTAGCTTAGAGGATGGTGACCCTTACTTAGCTATATTTCAAGATATGTTGAAACCAATTCATGTCTCTTATTACATAGAGCCAATTTTTGGAGAAGGACATGTTTTGATTCTTCCAACACCACCCGGTGAGGGTCCCTTAGGAAGGGTAGTAATGGTGACACTTGAAGAAGAAGAGGCAATTAAGCTTTGTGAAGATGAATTTATTTCACAATTCTCTCCTAATATCTTGATGAAATGTGTCAATAAATATTAA 1365 0.367 MATLVNIICKRTVVSTKAIQPGKYLPLSILDRFMEKNHIRMVYYYQTSEELELGKLTKNLRESLSEMLSHFPVVTGRLLKDDMGHWKIKCNDAGVRMVEAKAKGSVEEWLRNVDREKELKLVYWEDMHQKPYYWSTFYVQLTEFEEGGLAIGLSCTHLLADSICATNFMKVWADISLGNKLISPPIFHPLPSPKPQNKKPNNNSYMGLISHYKSSIEKPLFIKESKYTTISMGFSHYMVQACMSMAQINGSSSPSPKSTPFEALAGLFWVALSKIKGIQNGLVDMSIYLNVRKIMGLDEGFFGNSMLYNKVQLEENFNLDLYENKFPQATKAIRDAVANINNEEIMDLIEWFENNDINSSTMMIGHDLVFTSLEDGDPYLAIFQDMLKPIHVSYYIEPIFGEGHVLILPTPPGEGPLGRVVMVTLEEEEAIKLCEDEFISQFSPNILMKCVNKY 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g04512 454 Pfam Transferase family 5 429 - -
Vifa3g04512 454 Gene3D - 2 206 IPR023213 -
Vifa3g04512 454 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 22 431 - -
Vifa3g04512 454 Gene3D - 221 435 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g04512 Vifa-Chr3 1292747314 1292748800 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g04512 30 409 Acyl Lipid Metabolism Gene Families AT3G23840 24.611 8.07e-27 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g04512 - - psat:127096652 835.099