Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g04508 ATGGATCCTTTCAAACAAAAACCTAAGTGTTTATGGATTCATGGACCTATCATTGTAGGTGCTGGTCCTTCTGGTATAGCAGTAGCTGCTTGCTTATCAGAACAAGGTGTTCCGAGTCTTATTCTTGAGAGAAGTGATTGTATAGCTTCACTTTGGCAAAATAGAACCTATGACCGTTTGAAACTTCATCTACCTAAACATTTTTGTGAGCTTCCTTTGATGAGTTTTCCTCTAGATTTTCCTAAGTATCCTACCAAACATCAGTTCATTTCTTACATGGAATCCTATGCTGATCAGTTTGGTATTCGTCCTAGGTTTAACCAAACTGTTATCAGTGCTGAGTTTGATCCATGTTCTCAAATTTGGAATGTTAAAACACTAGATGGTTTTGACTATTCTTCACCTTGGCTTGTTGTTGCTACTGGTGAAAATGCTGAGCCTGTTATTCCTAAGATTCATGGTATGGAACATTTTCATGGTCCTGTTCTTCATACTAGTGACTATAAATCTGGTTCTCGATACAAAAACAAGAAGGTTTTGGTCATTGGTTGTGGTAATTCTGGTATGGAAGTTAGCTTGGATCTTTGTAGACACAATGCTCTACCTCACTTGGTTGCTAGAAACACAGTACACATGCTTCCAAGAGATATCTTTGGGTTCTCAACATTTGGTGTAGCTATGATATTAAATAAATGGCTTCCACTAAAATTAGTAGACAAGTTCCTCTTGTTAGTGTCAAGCTTCTTCTTAGGAAACACCAATCACTATGGTATCAAAAGGCCTAAAACTGGCCCTATAGAGCTCAAACTTGCCACAGGAAAAACTCCTGTCCTTGATGTTGGTCAAATTGCTCAAATTAAATCCGGTAATATTAAGGTGATGGAAGGTGTGAAGGAGATAACAAAGAGTGGTGCAAAATTTATGGATGGACAAGAAAAGGAATTTGATGCAATAATCTTAGCAACAGGTTACAAGAGCAATGTGCCAAGTTGGCTTAAGGGAAGTGATTTTTTCACTCAAGATGGAATGCCTAAAACACCCTTTCCTAATGGATGGAAAGGAGAGCAAGGATTGTATACGGTAGGGTTCACAAAAAGAGGACTACATGGAACATATTTTGATGCTATCAAGATATCTGAAGATATTACAAATCAATGGAAGACAATTAAGAACAAGAGTTGTAGTAGTGGTGATTCACATATCATAAACCTTATTACTACTAGTCTTAGTAATGTTTAG 1239 0.3729 MDPFKQKPKCLWIHGPIIVGAGPSGIAVAACLSEQGVPSLILERSDCIASLWQNRTYDRLKLHLPKHFCELPLMSFPLDFPKYPTKHQFISYMESYADQFGIRPRFNQTVISAEFDPCSQIWNVKTLDGFDYSSPWLVVATGENAEPVIPKIHGMEHFHGPVLHTSDYKSGSRYKNKKVLVIGCGNSGMEVSLDLCRHNALPHLVARNTVHMLPRDIFGFSTFGVAMILNKWLPLKLVDKFLLLVSSFFLGNTNHYGIKRPKTGPIELKLATGKTPVLDVGQIAQIKSGNIKVMEGVKEITKSGAKFMDGQEKEFDAIILATGYKSNVPSWLKGSDFFTQDGMPKTPFPNGWKGEQGLYTVGFTKRGLHGTYFDAIKISEDITNQWKTIKNKSCSSGDSHIINLITTSLSNV 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g04508 412 SUPERFAMILY FAD/NAD(P)-binding domain 174 373 IPR036188 -
Vifa3g04508 412 Pfam Flavin-binding monooxygenase-like 18 329 IPR020946 GO:0004499|GO:0050660|GO:0050661
Vifa3g04508 412 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 31 - -
Vifa3g04508 412 FunFam Flavin-containing monooxygenase 16 391 - -
Vifa3g04508 412 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 17 391 - -
Vifa3g04508 412 SUPERFAMILY FAD/NAD(P)-binding domain 17 212 IPR036188 -
Vifa3g04508 412 PRINTS Pyridine nucleotide disulphide reductase class-II signature 135 143 - -
Vifa3g04508 412 PRINTS Pyridine nucleotide disulphide reductase class-II signature 174 198 - -
Vifa3g04508 412 PRINTS Pyridine nucleotide disulphide reductase class-II signature 15 37 - -
Vifa3g04508 412 PRINTS FAD-dependent pyridine nucleotide reductase signature 16 35 - -
Vifa3g04508 412 PRINTS FAD-dependent pyridine nucleotide reductase signature 178 196 - -
Vifa3g04508 412 Gene3D - 16 390 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g04508 Vifa-Chr3 1290286299 1290288220 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g04508 K11816 - gmx:100798781 627.091