Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g04494 ATGGCTTCTTTAAACATATTCACCCCGGTTCCACTCACCGCCGGCATCGGGAATCCAACCAACAAATTCCCCCGGCGGCGTCACAACTCAGTTTCCTTCGTTTCAAATTCGCCGGAATCTGCTCCTGAAATAGAACTCGAATTCATTGCGCCTAAACCGGACGGCGAGGGGAAGTTTCCGGTGGATAAAGCGAAAGCAATTAGCGGCGAGAAGCTGATGAGGAGCATCATGTTGGATAACAAGATTGAACTTTATGCCACCTATGGGAAGTTGATGAACTGTGGGGGAGGTGGTAGTTGTGGAACTTGCATTGTTGAGATAATTGAAGGAAAGGATCTTTTAAATGAAAGGACAAATACTGAACTTAAATATCTTAAGAAGAAACCTGAGTCTTGGAGGCTGGCTTGTCAAACTATTGTCGGGAACAAAGAAAACTCTGGCAAGGTGGTTGTTCAAAGGATTCCTCAATGGAAGAAGTAA 480 0.45 MASLNIFTPVPLTAGIGNPTNKFPRRRHNSVSFVSNSPESAPEIELEFIAPKPDGEGKFPVDKAKAISGEKLMRSIMLDNKIELYATYGKLMNCGGGGSCGTCIVEIIEGKDLLNERTNTELKYLKKKPESWRLACQTIVGNKENSGKVVVQRIPQWKK 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g04494 159 PANTHER FERREDOXIN/ADRENODOXIN 29 156 IPR001055 GO:0051537|GO:0140647
Vifa3g04494 159 Pfam 2Fe-2S iron-sulfur cluster binding domain 91 140 IPR001041 GO:0051536
Vifa3g04494 159 Gene3D - 58 158 IPR012675 -
Vifa3g04494 159 SUPERFAMILY 2Fe-2S ferredoxin-like 73 142 IPR036010 GO:0051536
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g04494 Vifa-Chr3 1286688934 1286690702 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g04494 - - gmx:100807125 253.062