Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g04486 ATGGAAGGTAGAGAAGATAACTCCAATGGTGCTGCAATTCCTAAGAAATCAAGATCTCTTGATGTTAAAAGTTTGTATAAATCGAAATTGACAGAAGAGGGTTCGAAGAAAAACTCGAAGAGGAAGAGTAGTAGTGCTCCTGGGGGCGGTGATGAGACGAGGAGTAAGAGAAAGAAGGCTAAGAAAGAAGTGGTTTTGAGTAGTTTAGAAAATGGTGATGGTAGTGGGAAGAAGGTTGCTGATGAAGTATGTGAAAAAGGGGCTAGTTCGGGTGGGGGAGATTTGGGTGAAGTGAAATTGGGAGTGAGTGAAGTGTTTAATAGTGGTAGTGGGATTAATGGAGGTTTGCTTGGTGTTTGTATTCCTAAACGTAAAAGGACTTTAGTGGGGCGGAAGAAATCTGATCCTGGTCAATCATTGAGTCTGGTAGGGCATCCTAGTATTAGCGTTGGCCATGATGATCTGGTGCCTAAGTTAGGTAGTGATGATTTGGGTAGTAGGGCAGTTCAATCTTCAAAGAGTAATTTGAAGAAACATTTTGATGAATTTAAGGAAAATAGGAATAGTGATTCAAATTCAATTTCAGTTCAGCATGTCACGGAGAATGGGGATCATGCCCCTAATTCTGTTGTAAATAGTGGTATTTCTTCTTTAAAAAAGTCCAAAAAGAAAGATAGGAAGCGAAAGACTCTGGCTTCAGATAAACCTAGGGTTTCGAAGGAGGCTGAGCCTTTGATTGATAGCTGTACAATATCTGTTGATTTGCAGGATGATGATGAGGAAAATCTTGAGGAGAATGCAGCCAGGATGCTTTCTTCAAGGTTTGATCCAAGCTGTACTGGGTTTTCTTCTAGTAGCAAGTCTTCTCCCCGGCCATCAGCAAATGGTTTGTCCTTTTTTCTATCTTCTAGTCAAAATATTGTTAATCGTGGCTCAAAGTCTCGGTCAGGTTCGGAATCAGCTTCAGTTGATACTGCTGGCAGACATTTGAGGCCAAGGAAGCAAGACAAAGATAAGGAAAAATCCAGGAAGAGGCGCCATTTTTATGAAGTTTTGCCTGGTGATGTAGATGCATATTGGGTACTGAACCGTAGAATTAAAATATTTTGGCCTTTAGACCAGAGTTGGTATTATGGCCTTGTCAATGAGTATGACGAGGCGCAAAGGCTTCACCATATTAAATATGATGACCGAGATGAGGAATGGATTAATCTCCATACTGAGAGGTTCAAACTCTTGTTACTTCGTAATGAAGTTCCTGGACGTGCAAAAGGGAGAAGGGATTTGACAAAAAGTAGAAGGTCTGATCAGCAAAACGGAAGCAAGTCCGAGAAAGAAAGGCAAAGAAGAGAAGTGATTACGAAGGATGATAGTTGTGGTGGGAGCTCTATGGACTCAGAGCCTATAATTTCGTGGTTGGCTCGATCTTCTCATCGGCTTAAATCTTCTTTTCATGGGATTAAGAAACAGAAAACTTCTGTCACACATCCAAGTCCAACCTCATCATTGTTATACGATGAACCTGTTTCAGTAAAGGGAAATGAAACTAAGAGTTCATCTAGGGATGTTTCAAATAATTTTTCTTGTGGTTCTATATCACAAGAAAAATTAAGTGATGATTTGAGGGAGAAGTCCTCATTGCAAAGTGCCACTCAAATTAAAGATTCCAAACAGCCTGCTGTATATTTTAGAAAGCGGTTTCGAAGGCCAGCTGGAATGTTGCCTCCTGCGCCTAAAGAGAAACACATCATTGTAAGAACACCCTGTTCTATTTCCTTTGATCATGTGGTTGGTGGGATTCAGAATGTAAAACAACCAAGGGGCAGGAGGTTTGAGGGGCCACTGTGGTTCAATTACAACGAGGGAGTATCAAAAATGTTTTGGAACATGGAGTCAGCATCATTCAAATTCCACTTAAATTTTCCTATACGGTTGATTCTAAATGAAGCTTTTCAATCTGAAAATCTGTGGCTGCTCTATGCTGTTTTACTGCTTCGGTATGGTACAATTGTGACCAAGTGGCCAAGAGTTTGTTTGGAGATGCTGTTTGTTGATAATGTAGCTGGGTTGAGATTTCTATTATTTGAAGGTTGCTTGAAGATGGCTGCAACCTTTGTCTTTTTTGTCCTTAGGGTTTTCCACCAACCTGCTCCCCTAGGGAACTATGACTTGCACTTGCAGCTTCCATTTACATCCGTTGGGTTCAAGTTTTCCAGTCTTCATGCTATCAAGCAGCCACTTGTGTTTGCACTCTACAATTTCTCCAGATTGAAGAGTTCACGTTGGGTGTATTTGGATTCCAAGCTGAAGAGACACTGCTTACTCAGTAAGCAGCTCCATCTATCTGAATGCACATATGATAACATCCAGGCACTTCAGCATGGATCAAGTGAGTTCACCGCAGCTTCCATCAGCCGGCCCTCGTCAGTCAAGGTCATGAGGAAGAGGAGTAGGCCAGGGATTAACATCATGGGTGTTTCTAAAGTGTCCTCTCAAGTTAATACTCATCAATCTTCTGATTCTGGCGAGAGGAAGCTTCCTCCATTTGCTCTTTCTTTTGCTGCTGCGCCTACTTTTTTCCTCTGTTTGCATCTTAAATTGCTTATGGAGCAGTCAACAGCTCACATAGGCTTTTGTAATCAGGAACCAACAGATGGTCAGGAAGATTCTGGTTTGGTCACTGATGACTATTCTAACATTGATGATTGCTCTAACAGGAGTTCAGAAATTATTCTGCAGAAAGATACGACAACCTTGTCAAATGAAGCTACAGGTGATGGACGGCCCTGTCCTGGGTTAGATCCTTTAATGGGCCCCTCTGCTAGTGGTGATCAAGCTGTCTCTCAAAATGGCAAGAGTATTGACCTTCATGGTACTGGAACTTCTATTTCCCATGGTTCTGAGGGGCTTGGTAATACTCACTCAGCAGAGTCACAATCCCATCATTCAGCCCCAAAGCTAGGATCTTTACCTTCAAGTTCTTTTATACACCAGGATAAGATGGATGAAGGTTCTCATTCTTTTAACGGTGATCTCCATGTTCAGATTCCTTCTGTTGATGAATTTGAGAAGCCTAATAATGCTCAACAGTCTCCTGATTTGTCTTGGAATGTAAATGGAAGTGTTATTCCAAGCTCCAATCGAACTGCTCCAAGAAGTTCCTACCGGAGCCGGAATAGTTCAATGTCATTGGGATTCCAGTCACCTTTGTGGTCTGATGGCAAGCCTGACTCTCTTTACAATGATTTTAGCAGTGGACCCAAAAAGCCACGTACACAAGTATCATATTCAGTGCCTTTTGCAGGGTATGAGTTAAGTTCAAGGCACAGAGGCCATAATCAGAAAGGGCTTCCTAACAAACGAATTAGAAAGGCTAGTGAGAAGAAGTCATCAGATGTTGCTAGGGCCCCTGAAAAGAATTTTGAATGCTTATCTTGTGATGCAAATGTCTTGATTACAGCTGGTGATAAAGGGTGGAGAGAATATGGGTCCCATGTTATACTAGAGATGTTTGAACATAATGAGTGGAAACTCTCCGTAAAAGTTTTAGGAGTTACAAGGAGTCAGTGGGCTCTATTCAAGGAGATGCACGAGGAATGCTACAACCGGAACCTGCGTGCTGCTTCAGTTAAAAACATACCTATTCCTGGTGTTCACTTGATAGAAGAAAATGATGATAATGGATCTGAGGTAACTTTTGTTCGGAGCTCTATGTATTTCCAACAGGTTGAAACAGATTTCGAGATGGCTCTGAATCCATCCCGGGTTCTATATGACATGGATAGCGAGGATGAGCAATGGTTTTCGAACATTCGAGGTTCTGATAAGTACAACAGTGACTTGAATGGGATCACGGAGGAGATGTTTGAGAAGACAATGGACCTGTTTGAAAAGGCTGCATATGCTAAGATGCGTGATCAGTTTACACCACATGAAATAGAGGAACTCACGTTTCACGTTGGGCCTTTGGGTATAGTCAAAATCATTTATGACCATTGGCTCCAGAGAAGGCAGAAGAAGGGAATGGCTTTAATACGACACTTTCAGATGCCTATGTGGGAACGATATCAACAGAAACTGAAGGAGTGGGAAGTAGCGGTGACCAAGAATAATATTTCTTCTAATGATTGCCTGGACAAGGGTGCAACTTTGGAGAAGCCACCCATGTTTGCTTTCTGTCTGAAACCAAGAGGTTTGGAATCACAGAACAAGGGATTAAAACATCGATCTCAAAAGAAAATATCAGTCTCTGGGCATACAAACAGATTCCGATATCACGATGGTTTCCAAACTAATGGAAGAAGACCAAATGGCTCAGCATTTTCTGATGAAAGGTACCCAGGCCATAATTATGATTCTTTGGATGATTCTCCATTGCCTATGACATCACCAAGAGTATTCTCCCAACGGGATACTGCCAGCATGAAATATTATTCTATGAGCAATGATGTATACTACAGAAATCATATGCAGAAACTTAACAGGAGCAAGTCCAAGAAACTTGGGTCATTTATGCATAATAATGATTCGCGTACACCGTCTTCCTACAGCCAGAGGCTGCCAGCGTCGTCAGCTAAAAGAAACGGGGTTAGAACAAACATGGTCAAATATGAGTTACCAGGTCAAAGGAAGTACGTACCAGATAGCCCTCAGAAGCAGTGGATTGAACAACTGAATGGTTCAGACCTAGAGGAGTTTAGACGGCGTGACTTAGTAAATGCTGCTCAGCGTGCACGCAAAATAGCTAAGTTAAAGAGAGAGAGGGCTAAAAAATTGCATTCTAGAGCAGATGTAGCAATTCACAGGGCCATGGTTGCTCTTATGATTGCTGAAGCAAAGAAAGCTTCCGAGGAAGAGGTTGGTGAAGGTAATAAGAACCAACATACGAGGCTCCGATAA 4899 0.4193 MEGREDNSNGAAIPKKSRSLDVKSLYKSKLTEEGSKKNSKRKSSSAPGGGDETRSKRKKAKKEVVLSSLENGDGSGKKVADEVCEKGASSGGGDLGEVKLGVSEVFNSGSGINGGLLGVCIPKRKRTLVGRKKSDPGQSLSLVGHPSISVGHDDLVPKLGSDDLGSRAVQSSKSNLKKHFDEFKENRNSDSNSISVQHVTENGDHAPNSVVNSGISSLKKSKKKDRKRKTLASDKPRVSKEAEPLIDSCTISVDLQDDDEENLEENAARMLSSRFDPSCTGFSSSSKSSPRPSANGLSFFLSSSQNIVNRGSKSRSGSESASVDTAGRHLRPRKQDKDKEKSRKRRHFYEVLPGDVDAYWVLNRRIKIFWPLDQSWYYGLVNEYDEAQRLHHIKYDDRDEEWINLHTERFKLLLLRNEVPGRAKGRRDLTKSRRSDQQNGSKSEKERQRREVITKDDSCGGSSMDSEPIISWLARSSHRLKSSFHGIKKQKTSVTHPSPTSSLLYDEPVSVKGNETKSSSRDVSNNFSCGSISQEKLSDDLREKSSLQSATQIKDSKQPAVYFRKRFRRPAGMLPPAPKEKHIIVRTPCSISFDHVVGGIQNVKQPRGRRFEGPLWFNYNEGVSKMFWNMESASFKFHLNFPIRLILNEAFQSENLWLLYAVLLLRYGTIVTKWPRVCLEMLFVDNVAGLRFLLFEGCLKMAATFVFFVLRVFHQPAPLGNYDLHLQLPFTSVGFKFSSLHAIKQPLVFALYNFSRLKSSRWVYLDSKLKRHCLLSKQLHLSECTYDNIQALQHGSSEFTAASISRPSSVKVMRKRSRPGINIMGVSKVSSQVNTHQSSDSGERKLPPFALSFAAAPTFFLCLHLKLLMEQSTAHIGFCNQEPTDGQEDSGLVTDDYSNIDDCSNRSSEIILQKDTTTLSNEATGDGRPCPGLDPLMGPSASGDQAVSQNGKSIDLHGTGTSISHGSEGLGNTHSAESQSHHSAPKLGSLPSSSFIHQDKMDEGSHSFNGDLHVQIPSVDEFEKPNNAQQSPDLSWNVNGSVIPSSNRTAPRSSYRSRNSSMSLGFQSPLWSDGKPDSLYNDFSSGPKKPRTQVSYSVPFAGYELSSRHRGHNQKGLPNKRIRKASEKKSSDVARAPEKNFECLSCDANVLITAGDKGWREYGSHVILEMFEHNEWKLSVKVLGVTRSQWALFKEMHEECYNRNLRAASVKNIPIPGVHLIEENDDNGSEVTFVRSSMYFQQVETDFEMALNPSRVLYDMDSEDEQWFSNIRGSDKYNSDLNGITEEMFEKTMDLFEKAAYAKMRDQFTPHEIEELTFHVGPLGIVKIIYDHWLQRRQKKGMALIRHFQMPMWERYQQKLKEWEVAVTKNNISSNDCLDKGATLEKPPMFAFCLKPRGLESQNKGLKHRSQKKISVSGHTNRFRYHDGFQTNGRRPNGSAFSDERYPGHNYDSLDDSPLPMTSPRVFSQRDTASMKYYSMSNDVYYRNHMQKLNRSKSKKLGSFMHNNDSRTPSSYSQRLPASSAKRNGVRTNMVKYELPGQRKYVPDSPQKQWIEQLNGSDLEEFRRRDLVNAAQRARKIAKLKRERAKKLHSRADVAIHRAMVALMIAEAKKASEEEVGEGNKNQHTRLR 1632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g04486 1632 MobiDBLite consensus disorder prediction 51 66 - -
Vifa3g04486 1632 MobiDBLite consensus disorder prediction 174 188 - -
Vifa3g04486 1632 MobiDBLite consensus disorder prediction 485 529 - -
Vifa3g04486 1632 MobiDBLite consensus disorder prediction 326 344 - -
Vifa3g04486 1632 MobiDBLite consensus disorder prediction 1107 1133 - -
Vifa3g04486 1632 MobiDBLite consensus disorder prediction 423 463 - -
Vifa3g04486 1632 MobiDBLite consensus disorder prediction 308 344 - -
Vifa3g04486 1632 MobiDBLite consensus disorder prediction 942 998 - -
Vifa3g04486 1632 Pfam Enhancer of polycomb-like 1146 1298 IPR019542 -
Vifa3g04486 1632 MobiDBLite consensus disorder prediction 914 1011 - -
Vifa3g04486 1632 MobiDBLite consensus disorder prediction 1424 1438 - -
Vifa3g04486 1632 Gene3D - 363 408 - -
Vifa3g04486 1632 MobiDBLite consensus disorder prediction 130 259 - -
Vifa3g04486 1632 MobiDBLite consensus disorder prediction 1501 1525 - -
Vifa3g04486 1632 MobiDBLite consensus disorder prediction 487 529 - -
Vifa3g04486 1632 MobiDBLite consensus disorder prediction 189 217 - -
Vifa3g04486 1632 MobiDBLite consensus disorder prediction 20 40 - -
Vifa3g04486 1632 Coils Coil 1572 1592 - -
Vifa3g04486 1632 MobiDBLite consensus disorder prediction 1423 1462 - -
Vifa3g04486 1632 CDD Tudor_Agenet_AtEML-like 362 412 - -
Vifa3g04486 1632 MobiDBLite consensus disorder prediction 423 456 - -
Vifa3g04486 1632 PANTHER ENHANCER OF POLYCOMB 1019 1617 IPR024943 GO:0006357|GO:0032777|GO:0035267
Vifa3g04486 1632 MobiDBLite consensus disorder prediction 1023 1068 - -
Vifa3g04486 1632 MobiDBLite consensus disorder prediction 1 80 - -
Vifa3g04486 1632 MobiDBLite consensus disorder prediction 308 323 - -
Vifa3g04486 1632 MobiDBLite consensus disorder prediction 1023 1069 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g04486 - - gmx:100789801 1915.97