Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g04479 ATGGCTTTGGGGAGCAATGAGAAAAGAAAATCAATTTTGAATGTGAGGCTTGGAATGGATTCTGATTCTCTTAGAAGCCCCACTTCACCTCTAGATGTTACTTTGCTTTCAAATAGAGGTAACAATTTAAGAACATTATCATCTGATCAAGGACAAAAAAGGGGTTGGGACTGTACCAAAGTAGGTTTGAGTATCATAGATTCTTTGGAAGATTGTTCTAAATTTTCTAGGAATGTTCTAATGTCTACTGAGTTCAACAAGGGTAGTAGTCTCAGTCCTAATCCTAGTCCTCGAATAATTACTAAAGTACCGAGTTATAATCGCTGTTTGGATTCTGTCAAGGCTTCTAAGTCGTTGCCGAAAGATTTTTTTAAGCTGCCTTATACTCGTAATAGTTCTGTTTTTCGTAAGGGTGAATCGAGTGTTGTTTTTGAAATTGGTGAAACATTGGTAGAACATGAGTTACCCTTTGGGAAATCAATGTCTTGTTCATTGGACTTTTACGGTCCAATTGATGATTCGAAACCAGTGAGTTCTCCTCCTTGTTTTATTGGAGAAAATATGAATCCAAACATGTTGCTACCGATGTCTCTATCTGCAAGTGAGATTGAAAACTCTGAGGACTATACTTGTGTTATTTCGCATGGTCCTAATCCGAAGAAAACACATATTTATTGTGATTGCATACTGGAAGTTCATGCCGGTGATGATGTTAAAAAAGTTCTACATGAGAATGAAGAGAAGGAGGGTTTGTTTTGTTCCGTGGTTGACCGATTCGAGACTACAAAGCATTTTCCCTCTGCTGAGTTTTTGACTTTCTGCAACAGCTGCAACAAGAAGTTTGAAGAGGGTAAAGATATTTACATCTATAGAGGTGAAAAGGCATTTTGCAGTTTAACTTGCCGCGCCCTTGAGATTATGATTGATGAGGAGCTAGAGAAATCCAATGCACCACCATCTGAGAACTCTATCGAGTATGAATCTGGTGGAGAAGTTTTTGGATCTGGCATCTTCACTGCTGAATAG 1026 0.384 MALGSNEKRKSILNVRLGMDSDSLRSPTSPLDVTLLSNRGNNLRTLSSDQGQKRGWDCTKVGLSIIDSLEDCSKFSRNVLMSTEFNKGSSLSPNPSPRIITKVPSYNRCLDSVKASKSLPKDFFKLPYTRNSSVFRKGESSVVFEIGETLVEHELPFGKSMSCSLDFYGPIDDSKPVSSPPCFIGENMNPNMLLPMSLSASEIENSEDYTCVISHGPNPKKTHIYCDCILEVHAGDDVKKVLHENEEKEGLFCSVVDRFETTKHFPSAEFLTFCNSCNKKFEEGKDIYIYRGEKAFCSLTCRALEIMIDEELEKSNAPPSENSIEYESGGEVFGSGIFTAE 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g04479 341 ProSiteProfiles Zinc finger FLZ-type profile. 269 313 IPR007650 -
Vifa3g04479 341 PANTHER FCS-LIKE ZINC FINGER 11 18 340 IPR044585 -
Vifa3g04479 341 Pfam zinc-finger of the FCS-type, C2-C2 263 311 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g04479 Vifa-Chr3 1280983218 1280984597 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g04479 - - tpra:123914586 516.538