Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g04478 ATGGAAAATGGAATCGAAACCGAATCTGAAGAACAAGAACAATCAAACTCATCACAAGATCAATCAAACTCATCACAAGATCATCATCAGAAATGGATAACCGAGCAAGATAATCTGAGGGAAAAACTAATCAGTGAGGATAATTTCACATGGAAATTACCAGCGGCACCGCGAATTGGTTCGCAAGAGTTGAGATTCGTTGGTGGCTTTGATATAAGCTTCTCAAAGGATGATCCATCAATGGCGTGTGGTACCCTTGTAGTGTTGGATTTTCGTACTCTTCAACTTGTTTATCAGGATTTCTCTTTTGTCACACTTCATGTCCCTTATGTGCCTGGCTTCCTTGCGTTTCGCGAGGCTCCAGTTCTTCTACATATTCTGGAGAAAATGAAAAGGAGTGATAATCCTTTCTACCCTCAGGTGTTAATGGTTGATGGAAATGGAATACTTCATCCACGAGGTTTTGGCCTGGCCTGTCATGTTGGAGTTATGGCCAATCTTCCAACAATTGGGATTGGAAAGAGTTTGCATCATGTGGACGGTCTCCATCACTCTAGAGTTCAAAAACTTCTTGAAGCCGAAGAAAACTCTTCTAAAGATTTTATTCCATTGGTTGGTTGCTCCGGGCAAACATGGGGAGTGGCCATGAGATCTTCACATAGTTCCATAAAGCCGATATACATATCAATCGGTCACAGAATATCACTCCAGACCGCCACTGCGATTGTTCAGATGACTTGCAAGTACCGTATCCCTGAGCCTATTAGACAGGCTGATATAAGATCAAGAGACTACATTCGAAAGTTTGAAATGAATGCCAGACTGAAGCAAAATCACTGA 840 0.419 MENGIETESEEQEQSNSSQDQSNSSQDHHQKWITEQDNLREKLISEDNFTWKLPAAPRIGSQELRFVGGFDISFSKDDPSMACGTLVVLDFRTLQLVYQDFSFVTLHVPYVPGFLAFREAPVLLHILEKMKRSDNPFYPQVLMVDGNGILHPRGFGLACHVGVMANLPTIGIGKSLHHVDGLHHSRVQKLLEAEENSSKDFIPLVGCSGQTWGVAMRSSHSSIKPIYISIGHRISLQTATAIVQMTCKYRIPEPIRQADIRSRDYIRKFEMNARLKQNH 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g04478 279 Hamap Endonuclease V [nfi]. 28 269 IPR007581 GO:0004519|GO:0006281
Vifa3g04478 279 FunFam Predicted protein 27 274 - -
Vifa3g04478 279 Pfam Endonuclease V 55 259 IPR007581 GO:0004519|GO:0006281
Vifa3g04478 279 PANTHER ENDONUCLEASE V 20 272 IPR007581 GO:0004519|GO:0006281
Vifa3g04478 279 MobiDBLite consensus disorder prediction 10 29 - -
Vifa3g04478 279 CDD Endonuclease_V 30 264 IPR007581 GO:0004519|GO:0006281
Vifa3g04478 279 MobiDBLite consensus disorder prediction 1 30 - -
Vifa3g04478 279 Gene3D archaeoglobus fulgidus dsm 4304 superfamily 16 269 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g04478 K21813 - gmx:100527675 400.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g04478 3 1280717725 1280719749 Vifa3g04478 3 1280717725 1280719749 ECH