Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g04460 ATGGGTTTGAAAAGCTCTTCTCTTCTCTGCTTGGCTATTCTCCTTGCAGTTTCATCTTCCATTCATGCATTGGATATTGCAAAATTGTTAGCCAAAAGTCCTGAATTTGCCGCATTCACTAAAGCCCTAACCGAAACCAAGCTTATTGATCAAATAAACTCTCGCAACAGCATCACCATCCTCGCCCTCAATGATGGCGCTATGGGTGGATTATCTGGAAAATCCCCAGCGGCTACCAAGGCCATTCTCAGTACTCATGTGGTTCTTGACTTTTTCGATGAGAAGAAGCTCATGGAAGCTCAAGGAAGTGGTCAACTCTTGACCACCCTTTATCAAGCCTCAGGCTTCGCCCAAGACCAACAAGGGTTTGTTAAGGTTGCCCTCATCGGTGAGGGCGAGATTGCCTTTGGCTCCGCTGTTAAGGGTTCTCCCGTCGATGTTGAGCTCGTGAAAACTGTTGTCTCCCAGCCTTATAACATTTCGATACTCCAAGTTGCCAAACCTATCACATTTGCAGGAGTTGATTCACAAATCCCAGCTAATAACTCAAAAGCCCCAGCAGGAAGTGCTACTGCTAAGGCTCCCGTGGCATCAGCCAATGCTCCTATGCCGACCAAGGTAGCTGGAGCTAAAGCACCAGCTTCCCAAGCACCGCTGGCTGATGCTCCCACAACTGGAGCTGAAACTCCTACTTCAGAGGAAGTGATTGCTCCTACTCCTTCTGATGCAACACTTGCTGAATCCCCAACTGAAGGCCCAATTTCCGCCGACGCATCAAGCCCATCTTTGGCTCCTGGTCCTGCAGCTGGTGAGGCTGCCGCAGATGCTGAAGCTCCCGCCAACGGCTCTTCCAAAACTGTGGTAGGTTTGGTTGGAGCAGTGATATGCTTCGCTTCTATGATGGTTGTTATGTAG 915 0.4929 MGLKSSSLLCLAILLAVSSSIHALDIAKLLAKSPEFAAFTKALTETKLIDQINSRNSITILALNDGAMGGLSGKSPAATKAILSTHVVLDFFDEKKLMEAQGSGQLLTTLYQASGFAQDQQGFVKVALIGEGEIAFGSAVKGSPVDVELVKTVVSQPYNISILQVAKPITFAGVDSQIPANNSKAPAGSATAKAPVASANAPMPTKVAGAKAPASQAPLADAPTTGAETPTSEEVIAPTPSDATLAESPTEGPISADASSPSLAPGPAAGEAAADAEAPANGSSKTVVGLVGAVICFASMMVVM 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g04460 304 MobiDBLite consensus disorder prediction 225 257 - -
Vifa3g04460 304 SUPERFAMILY FAS1 domain 30 128 IPR036378 -
Vifa3g04460 304 ProSiteProfiles FAS1/BIgH3 domain profile. 23 154 IPR000782 -
Vifa3g04460 304 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 4 287 IPR033254 -
Vifa3g04460 304 Gene3D FAS1 domain 23 183 IPR036378 -
Vifa3g04460 304 MobiDBLite consensus disorder prediction 205 283 - -
Vifa3g04460 304 FunFam Fasciclin-like arabinogalactan protein 3 23 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g04460 Vifa-Chr3 1276296856 1276297770 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g04460 - - gmx:100798739 277.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g04460 3 1276296856 1276297770 Vifa3g04460 3 1276296856 1276297770 ECH