Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g04452 ATGCAACCCCAACAGAGTTCGAGAATTGATTTGGGTGAGTTGAAAGTACATATTGTAAAGAAGGTTGGACCGGATAAGTCGAAGCGGTACTTTTATTACCTTAACAGAATGCTTGTGAAGCCAAGACCCCCGCCATCAGTCCATCCATCAGGTTCTTCAAAATCGGGAACACGTGTTACTAATTTGTCTCCTGGTAGAGAAGATGGACACGAACAAAGTGTTGCTAACTTCCAAAATCATAATGCTTCCATTTGGCCAAATGGGGTTTTTCCTGTGTCTCCACAAGACGGTGATGTTAAGGTTGACATGGAGAATGGAACTCTTGCTCTCTGTGATTATCAGCGGCCAACACAGCAGCTTCAAACAGCTGCTGAGCTACCTAAGAATGTTATTGCTGATGGTATGCAACGACTTGCAAAGAAACCAAGAATACATGGCAAAGGGCTGACTGAAATGTCAACCGCGGAAGATGGAATGGAGGCGGAGCAGTTAAACCACCTCAATTTTGCCAGAAATCCGTTGATAGCACCACTTGGTATTCCTTACTGTTCTGCGAGTGTGGGTGGGGCCCGCAAAGCATTGCCGGTGAATAGTGCTGGTGATTTTGTTAGTTGTTCTGACAGTGGTAGGTTATCTGATCCAGATACGTTGAGAAGGCGCATGGAGCAGATTGCAATGGTACAAGGTCTTGGAGGTGTTTCTACGGAATGTGCAAGTATGTTGAATAGTGTATTGGATGTGTACTTGAAACGATTGATCAAGTCATGTGTTGATTTAGTAGGGGCTAGATCTGCAAATGAGCCGTCGAAGCTCCCAATCTCAAAGAAACAGATTCAGGGGAAGGTCGTCAATGGCATGATGCCACACAATCATTTACAAGTGCAGAATGCTGGTAGGTTAGCAGAATCTGAACCTGAACACAGACCCCAGTTCTCGGTATCTTTGCAAGACTTTAAAGTTGCGATGGAGCTAAATCCGCAGCAACTTGGAGAAGATTGGCCACTACAATTGGAGAAAATTTCTATGCAATCTTTTCAGGAATAA 1044 0.4435 MQPQQSSRIDLGELKVHIVKKVGPDKSKRYFYYLNRMLVKPRPPPSVHPSGSSKSGTRVTNLSPGREDGHEQSVANFQNHNASIWPNGVFPVSPQDGDVKVDMENGTLALCDYQRPTQQLQTAAELPKNVIADGMQRLAKKPRIHGKGLTEMSTAEDGMEAEQLNHLNFARNPLIAPLGIPYCSASVGGARKALPVNSAGDFVSCSDSGRLSDPDTLRRRMEQIAMVQGLGGVSTECASMLNSVLDVYLKRLIKSCVDLVGARSANEPSKLPISKKQIQGKVVNGMMPHNHLQVQNAGRLAESEPEHRPQFSVSLQDFKVAMELNPQQLGEDWPLQLEKISMQSFQE 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g04452 347 Pfam Transcriptional regulator of RNA polII, SAGA, subunit 130 260 IPR024738 GO:0070461
Vifa3g04452 347 PANTHER TRANSCRIPTIONAL ADAPTER 1 1 38 IPR024738 GO:0070461
Vifa3g04452 347 MobiDBLite consensus disorder prediction 41 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g04452 Vifa-Chr3 1273416732 1273417990 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g04452 - - gmx:100803746 484.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g04452 3 1273416732 1273417990 Vifa3g04452 3 1273416732 1273417990 ECH