Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g04165 ATGAAAAATGTGGTCTTGTTTTCATTCATTCTTTTGTTTGTTCTTCTCATCTTTTGTGCTAATAGAACCATCAAAAATGAAGAATCATCATTACAATCACTATATCATCATGTCAAAGTTAATACTCATTCAGGTTATGAACATATTTGGCCAAATATAGAACTTGGATGGGAAATCATTGTTGGTACTTTGATTGGAATCTTTGGAGCTTCATTTGGAAGTGTTGGTGGAGTTGGTGGTGGTGGCATCTTTGTGCCAATGCTTATATTGATTATAGGATTTGATGCAAAATCAGCTACTGCTATTTCTAAATGTATGGTTACTGGTGCAGCAATATCAACAGTATTCTTCAATCTAAAACTAAGACATCCAACACTTGATATACCAATGATTGATTATGATTTGGTGCTTTTAAACCAACCAGTAATAATTCTTGGTATTAGTATTGGAGTTGCTTTAAGTGTAGTTTTTGCAGATTGGATGATCACTGTTCTACTAATTATCATCTTCATAGTTACATCAGTGAAGGCTTTCATCAAGGGTCTTGACACATGGAAAAAAGAAACTATAGTTAAAGAGGAGTTTGTCAAGCATTTAGAGTCAACTGCCACTAGTAGTGAAGATGTTGAGTACAAGTATCTTGCTAGTTGTCCAGATGATGAGCCTCAAAAGAAAATTAATCAAGGTACCATTCTTAGCAATATTCAATGGAAGAAATTTGGACTTCTTTGTTTTGTTTGGATTGCGGTCCTTCTCTTGCAGATCGCCAAGAATTATACAGCTACATGTTCAATCACATACTGGATACTTACTTTGTTACAGATACCAGTTACTGTAGGGGTTTCTATGTACCAAGCAATAGGTCTATATCAAGGGAAGAAGATTACAGTTTCTAAGCAAGATCATGGCACACATTGGCCTTTGCATCTGCTAATTGTATCACTTTCATGTGCTTTGCTAGCTGGAATTTTGGGGGGACTTCTTGGTGTAGGTAGTGGATTTGTGATGGGTCCTTTGTTTATCGAATTCGGAATTGCGCCTCAGGTAGCAAGTGCCACAGCTACATTAGGAATGACATTCACAGCATCTATATCAGTTGCACAATATTTTCTCTTGAATCGTTTTCCAGTTCCTTATGCTTTCTATCTTAGCCTTGTGGCTACAATTGCAGCATACTTAGGACAGAAAGTCATTGACAAGCTTGTGAATATCTTTCAAAGAGCTTCTTTGATTATATTTGTCTTATCCTTCACAATTCTTGTTAGTGCAATTGCACTAGGTGGAGTAGGAATATCACATATGATTGAGAAGATTCAGAGGAATGAATATATGGGATTTGAAGATCTTTGCTACTAG 1356 0.3606 MKNVVLFSFILLFVLLIFCANRTIKNEESSLQSLYHHVKVNTHSGYEHIWPNIELGWEIIVGTLIGIFGASFGSVGGVGGGGIFVPMLILIIGFDAKSATAISKCMVTGAAISTVFFNLKLRHPTLDIPMIDYDLVLLNQPVIILGISIGVALSVVFADWMITVLLIIIFIVTSVKAFIKGLDTWKKETIVKEEFVKHLESTATSSEDVEYKYLASCPDDEPQKKINQGTILSNIQWKKFGLLCFVWIAVLLLQIAKNYTATCSITYWILTLLQIPVTVGVSMYQAIGLYQGKKITVSKQDHGTHWPLHLLIVSLSCALLAGILGGLLGVGSGFVMGPLFIEFGIAPQVASATATLGMTFTASISVAQYFLLNRFPVPYAFYLSLVATIAAYLGQKVIDKLVNIFQRASLIIFVLSFTILVSAIALGGVGISHMIEKIQRNEYMGFEDLCY 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g04165 451 Pfam Sulfite exporter TauE/SafE 7 176 IPR002781 GO:0016020
Vifa3g04165 451 Pfam Sulfite exporter TauE/SafE 277 415 IPR002781 GO:0016020
Vifa3g04165 451 PANTHER CEREBLON 35 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g04165 Vifa-Chr3 1228416028 1228418345 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g04165 - - tcc:18587930 512.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g04165 3 1228416028 1228418345 Vifa2g04187 2 1228448281 1228451788 PCT