Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g04059 ATGTCGTCGATGATCAAGTCTCTCGATATTCTCAAAACCCCTTCTTCAGTTAAAATCATCACTCTCACACTCTTCTCTATGACCCTTCTCATCTTTCTCATCACTCGCTATTCTCATACAACTACAATAACAACCATCTCTTCTTCTCTCACCTTCTTCTCCCCTTCTCCTCCTCCTCCTCCTCCACCTGATTATCACCACCAACAACCACCACCTCCACCTCCACCTCCACCTCCACGTCAACCTAAACCCTTCATTTTACCTCCGTTACCGCCGCTACACCGAATAGGTCTAATTGACCAAAATGGCGTCATGACAGACAATTTCACTGTCGGAAACGACGACTCACTGCTCAATTGGAATTGGAACAGCAGCAACAACAATGAATCACTTCTGGTGGGGAAGGAGGTTGATGTGGTGGTGAACAAGTATAAGATTTGTGATGATGTGAAAATGGTGGATTATATACCTTGTTTGGATAATGTTCAAGACATTGCCAAGCTTAATGCGAGTGAAAAAGGAGAAAAATATGAACGGCATTGTCCTCAACAAGAGAAGGCTTTGAATTGCATTGTTCCTAGGCCTAAAGGTTATAAGAAACATATTCTTTGGCCACAAAGTAGAGACCAGATTTGGTTCAGTAATGTACCCCATACACGTCTGGTTGAGGATAAAAGTGGCCAAAATTGGATATCAATAAAGAAGGATAAGTTTGTTTTTCCAGGAGGTGGAACACAGTTTATACACGGCGCAGACAAATACCTGGATCAGATTTCTGAGATGGTTCCTGACATTACATTTGGTTACAACACAAGAGTTGCATTGGATATTGGCTGTGGAGTGGCAAGTTTTGGTGCATTTTTGATGCAACGTAATGTGACCACTCTTTCAATAGCACCAAAAGATGTTCATGAAAACCAGATTCAGTTTGCTCTTGAGCGTGGCGTGCCTGCCCATGTAGCAGTATTTGCTACACATCGTTTGATGTACCCGAGCCAGGCATTTGACCTCATCCATTGTTCTAGATGCAGAATTAACTGGACTCGTGATGATGGAATTCTGCTTCTTGAAGCAAACAGGCTTCTGAGAGCCGGTCGCTACTTTGTGTGGGCAGCGCAGCCTGTATACAAACATGAAGTGAGTCTTCAAGAACAATGGAAAGAAATGGAGAACTTGACAGCTAGCATGTGTTGGGAACTTGTACGGAAAGAGGGTTATATTGCTATATGGCGGAAACCTATTAATAACAGCTGCTACCTTAGTCGTAATATATCTGTGCGTCCTCCATTATGCAAGTCCAATGATGATGCAGATGATGTTTGGTATGTTGGTCTTAAGGCATGCATAACACAATTGCCTAATAATGGATATGGAGTGAATGTTACTAACTGGCCTTCACGCCTCCATCAACCACCAGACAGACTTCAAAGCATCAAAATGGATGCCGTTATATCCAGAAAGGAACTCTTTAGGGCCGAATCAAAATATTGGAATGAAATAATTGAGAGTTATGTTCATGCTTTCGGTTGGAAGAAGCTCAACTTAAGAAATGTAATGGACATGAGGGCAGGATTTGGAGGGTTTGCTGCAGCAATGCATGATCTCGAGATTGACTGTTGGGTTATGAATGTTGTTCCTATTAGTGGATTCAATACCTTGCCTGTTCTATACGACCGAGGGCTAATAGGAGTTATGCATGATTGGTGTGAGCCATTTGATACATATCCAAGAACATATGATCTGCTAAATGCAGCCGGTCTCTTCTCTGTTGAAAAAAAGAGGCAAAAGTGTAACATTTCAACCATCATGCTCGAGATGGATCGCATGCTTAGACCAGGTGGTTATGTATATATACGCGACTCGGTGGATGTCATTAGTGAACTTAAACAAATTGCGAAAGCAGTTGGATGGGTTACTGTCCAGGATGATGTGGGAGAGGGCCCATATGCAAGTTGGAAGATATTAAGGTGTGAGAAGCACTTCTGA 1986 0.425 MSSMIKSLDILKTPSSVKIITLTLFSMTLLIFLITRYSHTTTITTISSSLTFFSPSPPPPPPPDYHHQQPPPPPPPPPPRQPKPFILPPLPPLHRIGLIDQNGVMTDNFTVGNDDSLLNWNWNSSNNNESLLVGKEVDVVVNKYKICDDVKMVDYIPCLDNVQDIAKLNASEKGEKYERHCPQQEKALNCIVPRPKGYKKHILWPQSRDQIWFSNVPHTRLVEDKSGQNWISIKKDKFVFPGGGTQFIHGADKYLDQISEMVPDITFGYNTRVALDIGCGVASFGAFLMQRNVTTLSIAPKDVHENQIQFALERGVPAHVAVFATHRLMYPSQAFDLIHCSRCRINWTRDDGILLLEANRLLRAGRYFVWAAQPVYKHEVSLQEQWKEMENLTASMCWELVRKEGYIAIWRKPINNSCYLSRNISVRPPLCKSNDDADDVWYVGLKACITQLPNNGYGVNVTNWPSRLHQPPDRLQSIKMDAVISRKELFRAESKYWNEIIESYVHAFGWKKLNLRNVMDMRAGFGGFAAAMHDLEIDCWVMNVVPISGFNTLPVLYDRGLIGVMHDWCEPFDTYPRTYDLLNAAGLFSVEKKRQKCNISTIMLEMDRMLRPGGYVYIRDSVDVISELKQIAKAVGWVTVQDDVGEGPYASWKILRCEKHF 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g04059 661 CDD AdoMet_MTases 275 369 - -
Vifa3g04059 661 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 178 398 IPR029063 -
Vifa3g04059 661 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 133 641 IPR004159 GO:0008168
Vifa3g04059 661 Gene3D Vaccinia Virus protein VP39 252 416 IPR029063 -
Vifa3g04059 661 MobiDBLite consensus disorder prediction 54 86 - -
Vifa3g04059 661 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 490 641 IPR029063 -
Vifa3g04059 661 FunFam probable methyltransferase PMT3 250 413 - -
Vifa3g04059 661 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 154 659 IPR004159 GO:0008168
Vifa3g04059 661 SUPERFAMILY Formin homology 2 domain (FH2 domain) 58 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g04059 Vifa-Chr3 1196268531 1196272423 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g04059 - - gmx:100809916 935.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g04059 3 1196268531 1196272423 Vifa3g04059 3 1196268531 1196272423 ECH