Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g04027 ATGCGTACGCAACACGCCGTAGAGGTGGCCAAAACGGTGCTTGAAGTCGCCGACGTCGCTTGGACCGCCGTTGAATGCGGCCACCATCTCCGTCATCATAATCCCGCTCTCACCCCCAGCGATAACGCCATCCTCCCTTCTGACCATGACTTGGAGTCTCTCCAATCGGAAAATCGACGCCTCAGAAGCTTGCTTGATCAGAATCTTAAGCTTCTGAGTAACCTCTCCGAATCTAATTCATTCATCAACAATTGCCCTCCCGATTTGCACGTGCGATTAGCTGCTACGGTGAGGTCTGACGAGTATTTGACTCGGCTCAAGTTTCTACAAAAGGAAACTGCTAGTGGTGGGAATCAATTTCCTTTTAAGGAGGCCACTGAGGTTGATTATCGATCGGCTGATATTTTAATCAATGTGGATGCTAAAGAGCCGAGTTGGTGGGTTTGGGTTGCTGATGAGACGGATCCGGTTAATTTTGAGGAATGTAGTGGAATTGACGATGAGAGTTACTTGATTATCAGTGAGGAACATGTGGTTGATGGAGTTGCTAACTTTATGGCAAGATGCATTATGTCAAACCCGAAAGCCCTGAAGTTGTCACCAGAGGAACTACAGGAAAATCTGTCTAAAGCATTTGCTGGTACAAGCAAACTGGAAAGGATTTTAGATATTTGGAATGCTGGGAAGTTGTTTTATACGCTTTCTACCTGGGGGCTTGCTTTGGCAGGGCTGTACCAAAGCCGTTCGTTGTTAAAAGTTGCAGCAAAGGGTGTTCATTCAGGCGGTAAACTCGCTCTCAAGTTAAAGGCTCTAAAGATGGCTGCTCCATGA 831 0.4681 MRTQHAVEVAKTVLEVADVAWTAVECGHHLRHHNPALTPSDNAILPSDHDLESLQSENRRLRSLLDQNLKLLSNLSESNSFINNCPPDLHVRLAATVRSDEYLTRLKFLQKETASGGNQFPFKEATEVDYRSADILINVDAKEPSWWVWVADETDPVNFEECSGIDDESYLIISEEHVVDGVANFMARCIMSNPKALKLSPEELQENLSKAFAGTSKLERILDIWNAGKLFYTLSTWGLALAGLYQSRSLLKVAAKGVHSGGKLALKLKALKMAAP 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g04027 276 PANTHER RING FINGER PROTEIN 16 268 - -
Vifa3g04027 276 Coils Coil 51 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g04027 Vifa-Chr3 1187992199 1187993861 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g04027 - - mtr:11418205 429.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g04027 3 1187992199 1187993861 Vifa3g04027 3 1187992199 1187993861 ECH