Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03942 ATGGCATCTTCTTCTTCTGTCTCATCAGATAGCAAACAGCAAGGATTTGTTTGTGGTATTGAGGATAAAAATTCAGTTCATGAAAATATTCTTCAGAAACATGTTGCTTTCTTTGATATCAATAAAGATGGTGTTATTTATCCATGGGAGACTTTCCAAGCAATGCGTGAAATTGGAAGTGGGGTGTTGTTATCAACTGCAGCTGCTGCTTTTATCAATGTGGCCCTCAGTCAATCTACTCGTCCCGGAAAGTTTCCATCTCTACTTTTTCCAATTGAAGTTAAGAATATCCAACTAGGCAAACATGGCAGTGACAGTGGAGTTTATGATAGTGAAGGAAGGTTTATTGCTTCAAAATTTGAGGAAATTTTCATTAAACATGCACATACACATCCAAATGCTTTAACACATGATGAGCTCGATGAGTTGATTAAGGCAAACAGAGAGCCTAAAGATTTCAAAGGAAGGATTGGTGGCTTTGTTGAATGGAAAATTCATTACAAACTTGCTAAAGACAAGAATGGTTTACTTCAGAAAGAAACAATCCGTGGTGTTTATGATGGAAGCTTGTTTCAAGTGCTCAAAAACGAACATACAAAAAGAATTAGTTCATCCTAA 618 0.3641 MASSSSVSSDSKQQGFVCGIEDKNSVHENILQKHVAFFDINKDGVIYPWETFQAMREIGSGVLLSTAAAAFINVALSQSTRPGKFPSLLFPIEVKNIQLGKHGSDSGVYDSEGRFIASKFEEIFIKHAHTHPNALTHDELDELIKANREPKDFKGRIGGFVEWKIHYKLAKDKNGLLQKETIRGVYDGSLFQVLKNEHTKRISSS 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03942 205 Pfam Caleosin related protein 28 194 IPR007736 -
Vifa3g03942 205 PANTHER PEROXYGENASE 3-RELATED 16 200 IPR007736 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03942 Vifa-Chr3 1164514040 1164520285 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g03942 28 203 Acyl Lipid Metabolism Gene Families AT1G70670 63.068 4.94e-82 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g03942 K17991 - gmx:100800915 303.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g03942 3 1164514040 1164520285 Vifa3g03942 3 1164514040 1164520285 ECH