Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03831 ATGTATTCTATTACCAAATTTTCTCACCATAAAGACACAACCATGAACACCACAAAAAGATACAATGAAATATCCCATTTCAGCCACTCAAAACACAAACTAACATTCCAATACTCAGAATTCCCATTCAAATGTGATGGCTGCAAAGAAATCGGCATAGGCTCACGTTACAACTGCACCACTTGTGACTATGATCTTCACATGCATTGTTCCATACCATCTCCTTCTCTTTTCCACCCTTTCTACCCTAAATGCTGCTTCCAGTTCCTCTCAAAGCCACCCGGTGACATACCTCGTTACTGCAACGCCTGCAAAAAGAGTGTCACGGGTTTTGTATATCACTGCTTTTCGTGTGGTTTTGATCTTCATCCTTGTTGTGCTAAGCTTCCAATGATACTCGATGATCACGGTGAAATGAAGTTGTATCTATATTGTAAAGTGAGTGCGTCTTGTCAGCGTTGTGGGCAAAAAGGAAGAAGCTGGAGTTACAGGTCATCATGTAAGAAGTATAACCTGCATGTAGCATGTGTGAGGGAGATGATAGTGGAGAGTTGGCATCAGATTTACGTTGGTCAGAACAATGGAACAGCAACAACAATGATTGAAACAAGGGTTCCTCTGAGTTTTAAGAATAGTCTGCACACTGCACAAAATGGTGGGGGGAGAAGCAAAAGTAAGGTGAGGAAGTATGCTGAGATGGCTGGAGTGGCTGTACAGATTGTTGTCTCTGCTGTCTTAGGAGATCCGACGGTTCTTATTGCTGGGATTATGGGGTCATTGATGTCAAGAGGTTGA 795 0.4252 MYSITKFSHHKDTTMNTTKRYNEISHFSHSKHKLTFQYSEFPFKCDGCKEIGIGSRYNCTTCDYDLHMHCSIPSPSLFHPFYPKCCFQFLSKPPGDIPRYCNACKKSVTGFVYHCFSCGFDLHPCCAKLPMILDDHGEMKLYLYCKVSASCQRCGQKGRSWSYRSSCKKYNLHVACVREMIVESWHQIYVGQNNGTATTMIETRVPLSFKNSLHTAQNGGGRSKSKVRKYAEMAGVAVQIVVSAVLGDPTVLIAGIMGSLMSRG 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03831 264 Pfam C1 domain 27 71 IPR004146 -
Vifa3g03831 264 Gene3D - 35 81 IPR043145 -
Vifa3g03831 264 PANTHER CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN 19 261 - -
Vifa3g03831 264 SUPERFAMILY Cysteine-rich domain 48 132 IPR046349 -
Vifa3g03831 264 ProSiteProfiles Zinc finger phorbol-ester/DAG-type profile. 31 85 IPR002219 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03831 Vifa-Chr3 1126104009 1126104931 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g03831 - - tpra:123902843 511.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g03831 3 1126104009 1126104931 Vifa3g03831 3 1126104009 1126104931 ECH