Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03829 ATGGGGGGGCGTATGAGTAAGAAGACTCCTGGAACGCCGTCTAATATCAACCTTAATGCTGATATGGTAACTCAACTGAGGTCATATGAAGCTGCCTGCAAGCTTGACTCAGATTTGCAGTCATTTGACACTCACCTTCAAGCTCGAACGAATCAGGAAGTTGTCAAGGTAATCTTAGACTGTAAGAAAGATATATGGGAGAGTCAAGAACTGTTTGAGCTTGTTGAGGAGTATTTCGATAACAGCTTGAAGACTCTAGATTTCTGCAACGCTTTAGACAAGTGCCTAAAGAGAGCTAGGGATAGTCAGTTGCTTATTCATCTCGCTCTTCAAAGGTTTGAAGAAGAATCTGTGTCGGGAGACAATTGCTACGCAAGGACGCTAGAGGAGCTGAAGAATTTTAAGGCTGTCGGTGATCCTTTCACGGAAGAATTCTTCCAAATATATCAATCTGTTTATCATCAGCAAGTACTCATGCTTGAGAAGTTGCAAGTCAGAAAAGGCAAGCTTGATAAGAAGCTGAAACAAATTCGTACTTGGAAGAAGGTCTCGCTTATCATATTTGTTGCCACGGTGGCTGCTGTGTTGATCTGCTCCGTTGTAGCGGCAGCCGTTGCTTCGCCGCATGTTGCGGCTGCTCTAGCTGCTCTTACTGCTATCCCAGTTGGTTCAATGGGAAAGTGGATTGATTCCTTGATGAAGAACTATGAAAATGCATTGAAAGGACATAAAGAAGTTACTATCGCATTGGAAGTTGGATCCTATGTAGCTATAAAGGATTTGGACAATATACGGATTCTAGTTAACCGACTTGAAGTTGAGATCGAATCCTTAAAGACGAATGTGGATTTTGCCATCGAGGAAGAAGAAGGGGTGAAGGTTGCAATAGAGGAAATCAAGAAGAAGTTGGGAGTTTTTATGAAGAATGTCGAAGATTTAGGAGCTCAAGCTGATACATGTAGCCGTGACATTATAAGGGCAAGGACGGTGGTTCTTCAAAAAGTCGTTAAACTTCCCCACAAGTGA 1026 0.4259 MGGRMSKKTPGTPSNINLNADMVTQLRSYEAACKLDSDLQSFDTHLQARTNQEVVKVILDCKKDIWESQELFELVEEYFDNSLKTLDFCNALDKCLKRARDSQLLIHLALQRFEEESVSGDNCYARTLEELKNFKAVGDPFTEEFFQIYQSVYHQQVLMLEKLQVRKGKLDKKLKQIRTWKKVSLIIFVATVAAVLICSVVAAAVASPHVAAALAALTAIPVGSMGKWIDSLMKNYENALKGHKEVTIALEVGSYVAIKDLDNIRILVNRLEVEIESLKTNVDFAIEEEEGVKVAIEEIKKKLGVFMKNVEDLGAQADTCSRDIIRARTVVLQKVVKLPHK 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03829 341 Coils Coil 261 288 - -
Vifa3g03829 341 PANTHER UPF0496 PROTEIN 3-RELATED 41 336 IPR007749 -
Vifa3g03829 341 Pfam Protein of unknown function (DUF677) 39 335 IPR007749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03829 Vifa-Chr3 1125614194 1125615312 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g03829 - - gmx:100802986 488.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g03829 3 1125614194 1125615312 Vifa3g03829 3 1125614194 1125615312 ECH