Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03414 ATGGCTATTCCCTTCCCTCATTTCATCTCCTCCGAGAAAGCCGCCATGGAAGCCGGCCTCCTCGTCCCTTCCTCCCCCTCCTCCTCCGTCTCCGTAATCCTCACCCAAGACGATTTGAAGAAAATCGCCGCCTACAAAGCCGTCGAATACGTCGAATCCGGCATGGTTCTCGGCCTCGGAACTGGCTCAACTGCCAAACACGCCGTCAACCGTATCGGGGAGCTTCTCCAGCAAGGGAAACTCAAGAACATCATCGGCATACCGACTTCAACGATCACTCACGAGCAAGCTCTGTCGCTAGGGATTCCTTTATCAGATCTCGATACTCACCCTGTCGTCGATCTCGCTATCGACGGTGCTGATGAAGTTGATCCGTATCTGAATTTGGTGAAAGGACGCGGCGGCTCGCTTTTGAGAGAGAAAATGGTGGAAGGTGCTTGTAAGAAATTTGTTTGCATTGTAGATGAGTCAAAATTGGTTAACTATTTGGGTGGAAGCGGTTTGGCTATGCCGGTTGAGGTTATAAAATTTTGTTGGAAATACACTGCTGGGAGGCTTCAGAGTTTGTTTGATGAATCTGGTTGTGTTGCGAAGTTGAGAACTTTTGGTGTTGTGGAGCATGGAATGTTTTTGGATATGGCTACTACTGTTATTGTTGCAGGTGAACTTGGGTTAACTGTGAAGAATAAGTAG 693 0.4834 MAIPFPHFISSEKAAMEAGLLVPSSPSSSVSVILTQDDLKKIAAYKAVEYVESGMVLGLGTGSTAKHAVNRIGELLQQGKLKNIIGIPTSTITHEQALSLGIPLSDLDTHPVVDLAIDGADEVDPYLNLVKGRGGSLLREKMVEGACKKFVCIVDESKLVNYLGGSGLAMPVEVIKFCWKYTAGRLQSLFDESGCVAKLRTFGVVEHGMFLDMATTVIVAGELGLTVKNK 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03414 230 Pfam Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 86 201 IPR004788 GO:0004751|GO:0009052
Vifa3g03414 230 NCBIfam ribose 5-phosphate isomerase A 39 201 IPR004788 GO:0004751|GO:0009052
Vifa3g03414 230 CDD RPI_A 39 221 IPR004788 GO:0004751|GO:0009052
Vifa3g03414 230 SUPERFAMILY NagB/RpiA/CoA transferase-like 35 183 IPR037171 -
Vifa3g03414 230 Gene3D - 34 178 - -
Vifa3g03414 230 FunFam Ribose-5-phosphate isomerase A 39 173 - -
Vifa3g03414 230 PANTHER RIBOSE-5-PHOSPHATE ISOMERASE 3, CHLOROPLASTIC-RELATED 203 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03414 Vifa-Chr3 982245157 982245963 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g03414 K01807 - gmx:100795150 378.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g03414 3 982245157 982245963 Vifa3g03414 3 982245157 982245963 ECH