Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03395 ATGAAGTCTCTATTTATATTCCCGTTTTTCTGTGCGATTTCCGTCGCCGCAGCCTCCACCGCCTATCCATCCGTCCCCGGCCTCGATTCCGGCGACTGCTCCCTCACCGGCGACGAAACGAATCTCGTTCCTCCACGCCGCGAAGTCTACGATGACGGACGAATATTCGATATCACCCACAGGTTCGTCCCTGAGATGCCGGTTTGGGACTCTAAGGAAGGGTTAGGGCACTGCGTTTGGCTTGCTGCTAGCATGAAGAATGGCTCATTCGCTAATGGCTCGGCTATGAAGCTCGGTGTTCACACAGGAACTCACGTTGACGCGCCGGGCCATTTCTATGATAATTACTACGACGCTGGATTTGATGTTGATACCCTTGATATAGGACTCCTCAATGGTCTTGTTCTTTTGGTTGATGTTCCACGGGATAACAACATAACTGCTGAAGTTATGAAGTCCTTGTATATCCCTAAAGGTGTACGCCGTGTGCTCTTCAGAACATTAAATACTGACAGGAAGCTTATGTTTAAGAAGGAATTTGACACAAGCTATGTTGGATTCATGGAGGATGGGGCAAAATGGCTGGTGGAGAACACTGACATCAAACTTGTAGGAGTTGATTACTTATCCGTTGCGGCATATGTTCACTCGGTTCAGTCTCATCTTGTTTTTCTGGAAAGCAGGGAAATCATTCTTGTGGAAGGCCTTAAGCTAGACGAAGTCCGTGAGTCACATGGTAGCAACATAGCCCGAATGTAG 759 0.4809 MKSLFIFPFFCAISVAAASTAYPSVPGLDSGDCSLTGDETNLVPPRREVYDDGRIFDITHRFVPEMPVWDSKEGLGHCVWLAASMKNGSFANGSAMKLGVHTGTHVDAPGHFYDNYYDAGFDVDTLDIGLLNGLVLLVDVPRDNNITAEVMKSLYIPKGVRRVLFRTLNTDRKLMFKKEFDTSYVGFMEDGAKWLVENTDIKLVGVDYLSVAAYVHSVQSHLVFLESREIILVEGLKLDEVRESHGSNIARM 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03395 252 Gene3D Putative cyclase 50 250 IPR037175 GO:0004061|GO:0019441
Vifa3g03395 252 FunFam Uncharacterized protein 50 206 - -
Vifa3g03395 252 SUPERFAMILY Putative cyclase 53 244 IPR037175 GO:0004061|GO:0019441
Vifa3g03395 252 PANTHER CYCLASE-LIKE PROTEIN 2 12 243 IPR007325 GO:0004061|GO:0019441
Vifa3g03395 252 Pfam Putative cyclase 56 211 IPR007325 GO:0004061|GO:0019441
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03395 Vifa-Chr3 972826170 972843693 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g03395 - - lja:Lj5g3v2133690.1 386.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g03395 3 972826170 972843693 Vifa3g03395 3 972826170 972843693 ECH