Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03357 ATGGCTAATTTCTCCGAGTTCCAACCATTGAACGAAAACACACTCATCGAATACATAAAATCCATCCCCGCACTTTCATCCAAACTCGCCAACAATTTCTCCGACATTTCCGTTAAAGAAGTCGGCGATGGCAACCTCAATTTCGTCTTCATTGTTTCCAACTCATCTGGTTCTCTCGTCATCAAACAGGCTCTGCCGTATGTTCGTTGCATAGGGGAATCATGGCCGATGACGAAGGAGAGAGCTTATTTTGAGTCGTTGGCTTTGAAAGAAGAGGGGAAACTGTGTCCGGAACATGTACCGGAAGTTTATCATTTTGACCGGGTTATGTCTTTGATTGGAATGCGTTATTTGGAGCCACCACATATAATTCTCAGAAAAGGGTTGATTGCTGGGGTTGAGTACCCTTTGTTGGCTGAACATATTTCGGATTTCATGGCGAATACGCTGTTCTATACTTCTCTGCTTTTTCGTTCTACTACTGAGCATAAACGGGACGTTGCCGAATTTTGCGGGAATGTGGAGTTATGTAGGCTCACCGAGCAGGTTGTTTTTTCTGACCCATATAAAGTTTCTGAATACAATCGCTGGACTTCCCCTGATCTTGATCGTGATGCTGAGGCTGTTCGGGAAGACAATCTACTGAAGCTTGAAGTTGCTGAGCTTAAATCAAAGTTCTGTGAGAGGGCTCAGGCACTAATACATGGAGATCTACACTCTGGTTCAGTGATGGTTACTCGTGAGTCAACTCAAGTTATTGATCCGGAATTTGCATTTTATGGACCAATGGGTTTTGACATTGGAGCATACCTTGGAAACTTAATTTTGGCTTACTTTTCTCAAGACGGACATGCTGATCAAGCAAATGACCGAAAAGGATATAAAGAATGGATTCTTAAGTCAATTGAAGACACTTGGAATCTTTTCCACGATAAATTCGCTGGACTTTGGGAAAAGCATAGAAATGGTGCTGGCGAGGCATATCTTCCAGCAATCTATAACAATCCCGAGGTTCAGCTGCTTGTGCAGAAGAAATACATGACAGATTTGTTTCATGACAGTCTTGGATTTGGTGCTGCCAAAATGATAAGGAGAATTGTTGGTGTGGCACATGTTGAAGATCTTGAATCTATTGCTGACACTGGTAAACGAGCAACCTGTGAACGGCGGGCACTTAATTTAGCTAAGATGCTTCTCAAAGAAAGAAGAAAATTTGAGAGCATTTCTGAAATTGTCTCGGCAATTCAGCAATTTTAG 1257 0.4232 MANFSEFQPLNENTLIEYIKSIPALSSKLANNFSDISVKEVGDGNLNFVFIVSNSSGSLVIKQALPYVRCIGESWPMTKERAYFESLALKEEGKLCPEHVPEVYHFDRVMSLIGMRYLEPPHIILRKGLIAGVEYPLLAEHISDFMANTLFYTSLLFRSTTEHKRDVAEFCGNVELCRLTEQVVFSDPYKVSEYNRWTSPDLDRDAEAVREDNLLKLEVAELKSKFCERAQALIHGDLHSGSVMVTRESTQVIDPEFAFYGPMGFDIGAYLGNLILAYFSQDGHADQANDRKGYKEWILKSIEDTWNLFHDKFAGLWEKHRNGAGEAYLPAIYNNPEVQLLVQKKYMTDLFHDSLGFGAAKMIRRIVGVAHVEDLESIADTGKRATCERRALNLAKMLLKERRKFESISEIVSAIQQF 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03357 418 Pfam Phosphotransferase enzyme family 38 276 IPR002575 -
Vifa3g03357 418 SUPERFAMILY Protein kinase-like (PK-like) 6 417 IPR011009 -
Vifa3g03357 418 PIRSF MTRK 2 418 IPR009212 GO:0009086|GO:0046522
Vifa3g03357 418 Gene3D Phosphorylase Kinase; domain 1 2 121 - -
Vifa3g03357 418 NCBIfam S-methyl-5-thioribose kinase 7 415 IPR009212 GO:0009086|GO:0046522
Vifa3g03357 418 Gene3D - 122 418 - -
Vifa3g03357 418 PANTHER METHYLTHIORIBOSE KINASE 4 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03357 Vifa-Chr3 961142125 961146624 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g03357 K00899 - gmx:100818359 744.577
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g03357 3 961142125 961146624 Vifa3g03357 3 961142125 961146624 ECH