Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03354 ATGCATGTCCTCTATTCTTTCGTAGCACTCCTTGCTATAATACATGGAATTCAAGCAGTTGATTACACTCTCACCAACACTGCTCTCTCTACTCCAGGTGGAGTTCGTTTCCGTGATCAAATAGGAGACCAATACGCGACACAAACCCTGGACTCCGCCACACAATTCATATGGAAAGTGTTCCAACAGGACAACCCTAGCGACCGAAAAGACGTGCAGAAGGTGAGTCTATTCATCGACGACATGGACGGAGTTGCGTTTACAAGCAACAACGAAATTCATGTTAGTGCAAGATACGTTAATGGCTACAACGGCGATGTGAGAAACGAAATTACAGGAGTACTGTATCATGAAATGACACATGTATGGCAATGGAATGGGAACGGTCAAGCAAACGGTGGATTGATTGAAGGTATAGCAGATTATGTGAGATTGAAAGCAAATTTTGCACCAAGTCATTGGGTTAAAGATGGACAAGGAGATAAATGGGATCATGGCTATGATGTTACTGCTAGGTTTTTGGATTATTGTGATAGTTTGAGAAATGGGTTTGTGGCTGAGTTGAATAAGTTGATGAAGAGTGGTTATAGTAATGATTTCTTTTTTCAGCTTTTGGGGAAGACAGTTGATCAGTTGTGGACAGAGTATAAGGCAAAGTACGGCAATATAGCTTAA 675 0.4148 MHVLYSFVALLAIIHGIQAVDYTLTNTALSTPGGVRFRDQIGDQYATQTLDSATQFIWKVFQQDNPSDRKDVQKVSLFIDDMDGVAFTSNNEIHVSARYVNGYNGDVRNEITGVLYHEMTHVWQWNGNGQANGGLIEGIADYVRLKANFAPSHWVKDGQGDKWDHGYDVTARFLDYCDSLRNGFVAELNKLMKSGYSNDFFFQLLGKTVDQLWTEYKAKYGNIA 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03354 224 Pfam Peptidase of plants and bacteria 19 216 IPR007541 -
Vifa3g03354 224 PANTHER - 8 220 IPR007541 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03354 Vifa-Chr3 961040762 961041511 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g03354 - - oeu:111411989 355.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g03354 3 961040762 961041511 Vifa3g03354 3 961040762 961041511 ECH