Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03335 ATGGCAACCCTCCCCTCCACCATTCCCTCCATCTCCTCCTCTCTCCCTCTCCACCGTCTCCGTCCTTCTCTCTCCATCTCTTTCTCCCCTCTCCGTTTCTCCACAAAACCCCGTTCCCCCTTTCTCGTCCTCGCTTCTTCATCACACTCCTTCGACGACACCAAGAAATCGGCTCTTTCTGAATTGATACACGAAATTGAACCTTTAGATGTCAGTTATATTCAGAAAGATGTGCCGCTAACGACGGCTGATGCTATGAAAAGGACTATTTCTGGTATGCTGGGATTACTTCCGTCTGATCAGTTTAATGTAGTTGTTGAGGCTCTGTGGGAGCCGCTTTCCAAGTTGTTGATTTCTTCTATGATGACTGGGTATACACTACGTAATGCTGAATACAGGCTTTGTTTGGAGAAAACTCTAGATACATGTGAAAGAGATATTGAGAAGCCAAAGGCAGAAAGTACGAAGTTCGACTTACAAGACTTCCTACGTGACAGTGTAAATATTGACTTTGGTAGAAAGAATAATTTGTCTTCCAAAGTTGAAAAGTCTCTCGAGGATGTCGATATTGAAGACCTTGGCAAATTATCTGCCGAAGCTCAAGAATTTATTTCCAGTCTGCAATCTCGTTTGTCTTCCATGAAAAAGGAACTACGTGAAGTGAAGAGGAAAAGTGCTGCTCTTCAAATGCAACAGTTTGTTGGAGAAGAAAAGAATGATCTACTGGATTACTTGAGATCACTTCAACCTGAACAGGTAGCACAGCTGTCAGAATTTACATCCCCCGAACTTAGGGACATCATTCTCTCTGTTGTGCACGGTCTTCTGGCTACCCTTTCTCCTAAGATGCATTCTAAACCTTCAACTACGTCAGAGAATGCAACAGTTGGAACAGCAAATGATGGAAGTGAGGATTGTGCCGAGGTTGTTGAGAATTCTTCACTTCAATTTCAGCCATTTATTTCATTAAGTCGGGACTATCTTGCCCGCCTGCTCTTTTGGTGCATGCTGTTGGGACACTATCTTAGAGGTCTTGAGTACCGAATGGACTTGACGGAACTGCTATCCTTGCCAAATGATGCTGAGAATGATGCTTCTGGGAGCGAACAAATTGTTTGA 1119 0.437 MATLPSTIPSISSSLPLHRLRPSLSISFSPLRFSTKPRSPFLVLASSSHSFDDTKKSALSELIHEIEPLDVSYIQKDVPLTTADAMKRTISGMLGLLPSDQFNVVVEALWEPLSKLLISSMMTGYTLRNAEYRLCLEKTLDTCERDIEKPKAESTKFDLQDFLRDSVNIDFGRKNNLSSKVEKSLEDVDIEDLGKLSAEAQEFISSLQSRLSSMKKELREVKRKSAALQMQQFVGEEKNDLLDYLRSLQPEQVAQLSEFTSPELRDIILSVVHGLLATLSPKMHSKPSTTSENATVGTANDGSEDCAEVVENSSLQFQPFISLSRDYLARLLFWCMLLGHYLRGLEYRMDLTELLSLPNDAENDASGSEQIV 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03335 372 PANTHER OS02G0833400 PROTEIN 47 361 - -
Vifa3g03335 372 Pfam Protein of unknown function (DUF760) 59 140 IPR008479 -
Vifa3g03335 372 Pfam Protein of unknown function (DUF760) 240 355 IPR008479 -
Vifa3g03335 372 Coils Coil 204 231 - -
Vifa3g03335 372 MobiDBLite consensus disorder prediction 283 300 - -
Vifa3g03335 372 MobiDBLite consensus disorder prediction 283 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03335 Vifa-Chr3 957677422 957680923 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g03335 - - gmx:547534 543.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g03335 3 957677422 957680923 Vifa3g03335 3 957677422 957680923 ECH