Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03330 ATGGACCGAGGAAAGATCGAAGAAGTTATCGAGAAGCAAGTCCTGACGGTTGCGCAGGCCGTCGAGGACAAGATCGACGAAGAGATCGCCGCCCTCGAACGCCTCGACGATGACGATCTTGAAGCCCTCAGGGAACGCAGGCTGCAACAAATGAAGAAAATGTCGGAGAAGCGTAGCCGTTGGATCTCCCTCGGACACGGCGAATACACCGAGATTCCTTCCGAGAAAGACTTCTTCTCAGTCGTCAAGGCCAGCGAACGCGTCGTCTGTCACTTCTTCCGCGAAAATTGGCCCTGCAAGGTTGTGGACAAGCATTTAAGTTTGTTGGCGAAGCAGCATTTCGAGACTCGGTTTGTTAAAATTAATGCTGAAAAAAGTCCATTTTTAGCTGAGAGGCTCAAGATCACTGTTCTTCCTACTATTGCCCTCATAAAGAATACCAAAGTGGATGATTATGTGGTGGGTTTTGATGAACTCGGTGGTACTGATGACTTTAGCACCGAGGTTTTGGAAGAAAGATTGGCTAAAGCTCAAGTCATCTTTTTAGAGGGTGAATCATCAATGCACCGTGCAAGGTCCACCGCGCAAAACAAAAGAAGTGTTCGGCAGGGCACACATGCAGACTCCTCAGATTCAGAGTAA 642 0.4844 MDRGKIEEVIEKQVLTVAQAVEDKIDEEIAALERLDDDDLEALRERRLQQMKKMSEKRSRWISLGHGEYTEIPSEKDFFSVVKASERVVCHFFRENWPCKVVDKHLSLLAKQHFETRFVKINAEKSPFLAERLKITVLPTIALIKNTKVDDYVVGFDELGGTDDFSTEVLEERLAKAQVIFLEGESSMHRARSTAQNKRSVRQGTHADSSDSE 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03330 213 MobiDBLite consensus disorder prediction 188 213 - -
Vifa3g03330 213 Gene3D Glutaredoxin 48 181 - -
Vifa3g03330 213 PANTHER THIOREDOXIN DOMAIN-CONTAINING PROTEIN 9 5 212 - -
Vifa3g03330 213 CDD Phd_like_TxnDC9 65 175 - -
Vifa3g03330 213 SUPERFAMILY Thioredoxin-like 6 177 IPR036249 -
Vifa3g03330 213 Pfam Thioredoxin 74 155 IPR013766 -
Vifa3g03330 213 MobiDBLite consensus disorder prediction 189 203 - -
Vifa3g03330 213 Coils Coil 18 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03330 Vifa-Chr3 956335679 956337473 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g03330 - - gmx:100814116 337.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g03330 3 956335679 956337473 Vifa3g03330 3 956335679 956337473 ECH