Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03318 ATGGCACTTTCTATTTCCCACTTCGTCTTATTTCTCCTTTTTCTCCAGTTTCCCTTCCAAACCATCTCAGCCAACTCTGAAGGGAATGCTCTTCATGCTTTGAGGAACAGGCTTTCTGATCCCAACAATGTTCTGCAGAGTTGGGACCCAACACTGGTTAATCCATGTACTTGGTTTCATGTTACATGTGACTCCAACAACCTTGTTACTCGCTTAGACTTGGGAAATGCTAATCTTTCTGGAACTCTGGGCTCAGAACTTGGTCATCTGCACAATCTGCAGTATTTGGAGTTGTATGGGAATGAGTTAAGAGGAAAGATTCCTAAGGAACTTGGAAAATTGAAAGCACTTATTAGCATGGATTTGTATGATAATAAGTTGGAAGGGAAAATTCCAAAGTCATTTGGCAAGTTGAAGTCATTAGAATTCTTGCGTCTAAACAACAACAAGCTTACAGGATCTATCCCAAGAGAACTCACTCGTCTAAAGCATCTCAAAATCTTTGATGTTTCGAATAATGATCTTTGTGGAACAATACCCGTAGATGGAAACTTTGGATCCTTTCCAATAAAAAGTTTTGAAAATAACAGATTTGGTGGTCCTGAACTGAAAGGACTTGTTCCGTACGATTTTGGATGCTAA 642 0.3941 MALSISHFVLFLLFLQFPFQTISANSEGNALHALRNRLSDPNNVLQSWDPTLVNPCTWFHVTCDSNNLVTRLDLGNANLSGTLGSELGHLHNLQYLELYGNELRGKIPKELGKLKALISMDLYDNKLEGKIPKSFGKLKSLEFLRLNNNKLTGSIPRELTRLKHLKIFDVSNNDLCGTIPVDGNFGSFPIKSFENNRFGGPELKGLVPYDFGC 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03318 213 Pfam Leucine rich repeat 119 175 IPR001611 GO:0005515
Vifa3g03318 213 SUPERFAMILY L domain-like 26 201 - -
Vifa3g03318 213 Pfam Leucine rich repeat N-terminal domain 24 64 IPR013210 -
Vifa3g03318 213 Gene3D Ribonuclease Inhibitor 23 202 IPR032675 -
Vifa3g03318 213 FunFam Somatic embryogenesis receptor kinase 1 23 208 - -
Vifa3g03318 213 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 8 191 - -
Vifa3g03318 213 Pfam Leucine Rich Repeat 92 114 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03318 Vifa-Chr3 952200361 952201938 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g03318 6 196 Receptor kinase-like Gene Family AT1G71830 58.673 4.85e-68 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g03318 - - gmx:100816279 362.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g03318 3 952200361 952201938 Vifa3g03318 3 952200361 952201938 ECH