Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03317 ATGAGCGGTATTGTTCTCAAGAAACGCTCTAACGTTTCCCATTTCATCATGTTGCAACGACAATCAATGTTCATAAACCATTCCTGTAATCCAATTAGACTTCATTCTCTTCTCTGCAACAAGCTTCATTCCAAACCTTACCTTCGATTACCGGATTTTGTCAAGAAACCCAAACAACATGAAATTTCTCCGGGGTCTTTGTTTTCTTCTTCGTCTTCTTCTTCAACAGCTTCCGTTTCGAAAGTTGGTTTTGTAGGTTGGTATTTGGGGATGATTAAGTCACATCCTATTCTCACTAAAAGTATTACTTCTGCACTTATTTATACCGCCGCTGATTTATCCTCCCAGACTATTGAGTGGCAACCATCAAAATCTTATGATTTTGTAAGGACTTTACGCATGGCGGGATATGGGATGATCATTTTAGGACCAACACTACATTTTTGGTTCAATTTTATGTCAAAGCTTTTCCCAAAGAGGGATCTTTTCTCTACATTGAAGAAAATGGTCATGGGCCAGACACTCTATGGACCTGCCATGACTGTTATTTTCTTCTCCTCGAATGCTGGTGTCCAAGGTGAAAACGGTAAAGAGATTGTTGCCCGTTTAAAGCGCGATTTGCTTCCTACATTGTTAAATGGAGTCATGTACTGGCCCATATGTGATTTTATTACTTTTAGATTCATTCCTGTCCATTTACAGCCATTAGTCAGCAATTCATTCGCGTACTTGTGGACCATTTATATGACCTATATGGCAGGCCTAGAGAAAGCCGAGATAACTAGCTGA 789 0.3967 MSGIVLKKRSNVSHFIMLQRQSMFINHSCNPIRLHSLLCNKLHSKPYLRLPDFVKKPKQHEISPGSLFSSSSSSSTASVSKVGFVGWYLGMIKSHPILTKSITSALIYTAADLSSQTIEWQPSKSYDFVRTLRMAGYGMIILGPTLHFWFNFMSKLFPKRDLFSTLKKMVMGQTLYGPAMTVIFFSSNAGVQGENGKEIVARLKRDLLPTLLNGVMYWPICDFITFRFIPVHLQPLVSNSFAYLWTIYMTYMAGLEKAEITS 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03317 262 PANTHER PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 84 252 IPR007248 GO:0016020
Vifa3g03317 262 Pfam Mpv17 / PMP22 family 191 249 IPR007248 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03317 Vifa-Chr3 951542876 951546927 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g03317 43 257 Miscellaneous Gene Families AT2G14860 67.442 3.83e-105 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g03317 K13348 - gmx:100816797 347.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g03317 3 951542876 951546927 Vifa3g03317 3 951542876 951546927 ECH