Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03316 ATGACGGTACCGAAACGAAACTATACTCGAATAAACACGTTGGAGCTGAAAGCTCTTATTCTACGAAAGGTTGGTAATCAGAGAGCTAACAAATACTTTGATCATCTTGGGAAATTGGTTAGTTCGAAGATCAGCAAGACTGAGTTTGACAAGATTTGTATCATGACGATTGGGAAGGAAAATATCGCTCTTCACAATCAACTCATTAAGGCAATTCTCAAGAATGTTTGTTTGTCTAAAGTCCCACCTGTTAGAGGGAATGCAAAAACAAGGAGTGTCTTGAATGCGAAAGATCCAAACCAGCAGCAGATTAGCCCGATTCAAATGCGGTACGGGGATGCGTTTCCGCCTTCTCTACGTAGGGGTGGTTCTTTGGCGACCTATGAAGCGACGCTTAAGAGCTTACAACCCCAAAGTCTTGCATCTAAATATTTGATGTATAAGACTCCAGAGCAGCAGAGTGCAACGGAGCTGAATTCCCTTGGCAGTAGGCCTCCCATTTCTGTGGAAGATGGAGAAGAGGTTGAACAGATTGCTGGAAGCCCGAGCATTCAAAGTAAGAGCCCAGTTACAGCTCCCCTTGGGATATCGATGAATTTCGGTCATGGACGCAAAGCTCTTTCTAGTGCACCATCATGCAGAAAGTATCCTCCAGAGACCTGTTTCAGCAATGGATATCTCCCTGACACCTCTTCTCTGAGGAGACGTTTGGAGCAAAAGTTGGAGAAGGAGGGTTTAACTATGACAGTGGATTGTGTAAATCTATTAAACAATGCCCTGGATTCTTATATGAAGAGGTTGGTTGAATCCTCCACGGGTTTATCTGGGCCGAGATTTGGAAATGAGCACCCAAGACAGCGAAATGTGCAGTCTGTAGCTGATTCAAATATGCTGCAACCCAGAAGATATATGCAAACAGCAACCCAATCTTCTGGCGCATCTCTCTTGGATTTTCGTGTTGCAATGGAATTAAATCCACAAGCTCTTGGATCAGATTGGCCTACACAGCTTGAGAAGATTTGTATACGTGCTTCTGAAGAATGA 1044 0.4397 MTVPKRNYTRINTLELKALILRKVGNQRANKYFDHLGKLVSSKISKTEFDKICIMTIGKENIALHNQLIKAILKNVCLSKVPPVRGNAKTRSVLNAKDPNQQQISPIQMRYGDAFPPSLRRGGSLATYEATLKSLQPQSLASKYLMYKTPEQQSATELNSLGSRPPISVEDGEEVEQIAGSPSIQSKSPVTAPLGISMNFGHGRKALSSAPSCRKYPPETCFSNGYLPDTSSLRRRLEQKLEKEGLTMTVDCVNLLNNALDSYMKRLVESSTGLSGPRFGNEHPRQRNVQSVADSNMLQPRRYMQTATQSSGASLLDFRVAMELNPQALGSDWPTQLEKICIRASEE 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03316 347 PANTHER TRANSCRIPTIONAL ADAPTER 1 4 346 IPR024738 GO:0070461
Vifa3g03316 347 Pfam Transcriptional regulator of RNA polII, SAGA, subunit 8 272 IPR024738 GO:0070461
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03316 Vifa-Chr3 951540264 951541307 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g03316 - - gmx:100817344 460.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g03316 3 951540264 951541307 Vifa3g03316 3 951540264 951541307 ECH