Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03276 ATGAACATGAGTGCATTTGATTCTGAATGTAGTAGTGGATGTGAGTCAGGTTGGACTCTATACTTCCAACATTCTTATGGAGAAAATACTAGATTCATAGATGGAAGTGAAGGGTATTATGGGAAATACAAAGACAAAAGAGTCATCACAAATGATGAAAATTACTCTCAAGATTTGTCCATGGTTTCTGATGCTTCTTCTGGTCCTCCACATATTCCTTATGACAATGAAAAACACAATGGTAATTCCTTAGTGAAACAAAACAACAAAAGTGAAACAAAGAAACAAAAAGTTAGAGAAAATGTTGAAGAAGTTCAACAAAATCTTCCTTCTTTTCTTCATGATACTGCTAGCTCTCATGTCTTTGACTTTTCAACTAACAATGTTATTGAGACAAATCAACAAAATTATTCACAAGGTTTTTCAGCAACTAACTATTTTGAGGGAAGATCTTCATATCAAGAAGAAAATTTTGGTTTTTTACAAGCATCTCAATCAGAAAATGAACTTCAAAGCAACAAGAGATGGTATGGAAGCAAAAAAGGTTTTGGAATGAGGTGA 561 0.3298 MNMSAFDSECSSGCESGWTLYFQHSYGENTRFIDGSEGYYGKYKDKRVITNDENYSQDLSMVSDASSGPPHIPYDNEKHNGNSLVKQNNKSETKKQKVRENVEEVQQNLPSFLHDTASSHVFDFSTNNVIETNQQNYSQGFSATNYFEGRSSYQEENFGFLQASQSENELQSNKRWYGSKKGFGMR 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03276 186 MobiDBLite consensus disorder prediction 62 96 - -
Vifa3g03276 186 Coils Coil 88 108 - -
Vifa3g03276 186 PANTHER OSJNBA0091C07.3 PROTEIN 6 164 IPR044670 GO:0009690|GO:0009691
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03276 Vifa-Chr3 939353383 939354235 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g03276 - - mtr:25485325 242.276
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g03276 3 939353383 939354235 Vifa3g03276 3 939353383 939354235 ECH
Vifa3g03276 3 939353383 939354235 Vifa3g03276 3 939353383 939354235 PCT