Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03265 ATGAAACTCAGGCTCAGATCTTTCGAATCCAAAGAAACCCTAAAAATCGAAGTTCCCGATCCATGTTCTCTTCAACAACTCAAATCCAAAATTTCCACCATCCTCTCTTCCTCTTCCTCTCTTCATCTTTCCCTCAACCGAAAAGACGAAATCACCCCTCCCTTTCCCACCGATTCCCTCCACTCACTCGGCATCGCCACCGGCGACCTCATCTTCTACACCTTCAACCCCACCGCCTTCTCCTCTCAAACCCTCCCCCACAAACCCGCCGCAGAAAACCCTCCGACTTTACCAGAAAAGCCCGCAGAACCGCAAACCCTAGAAATGGCGGATGCGTCCGATGAAACCGCGGTGAAGAACAATTCAGAACCTGATTTTGTGAAAAGGATTCTCAAAGAAGCGCTTGGTGATGATGTTACCGATTTCAAACTCTTGGTATTTGCGGTTCATGCTGTTATTTTCGAATCTGGATTTGTTCGTGTTGATCGAGATTCGGCTAAGGCGATTGATGACTTTTCGTCTTCTTCAATGATATCTTTGAGGTATACACTTCCTGAGAGTGTTACTAAAGGTTTATCTCATGCTGTGGATTTAAAGATTCAAACTTTAGGGAATTTTGTGAATGTTTATGGTTCTTTGGTTGATGATGTTGGGTCTAGGGTTCATAGGGTTTATTTAGATAAATTTAGGTTTGCTAAGCCTTTAGAGTTGATGCTAGCAAACTCTGAACCTAGTGGTAATGCTAGTGTTGGTGTTAGTGTTGATGTTAATGATGGTGGTGATGATGAAGTTTTTGAATTGTGGAAGATAGTGAAAGATAAGCTTGCATTGCCGCTTTTGATTGATCTTTGTGAGAAAGCTGGATTGGATCTTCCGCCTTGTTTTATGCGGCTTCCAATGGAACTTAAGCTTTTGATATTTGAGTATCTTTCGGGTGATGATTTGGCGAAAGTGTGTTGCACTTGTTCGGAGTTGTCTTACCTTGCGTCGAATGATGAGTTATGGAGGAAGAAGTTTGAAGAGGAGTTTGGAGATATGATGAATGGGATGAAGTTTTTTAAGAACTTGTTTGCGCATTATTGGGCAACTAAGAAGAAATCAAAACAAAAACCGCCATTTTTTCCAACTCCTCGGTCTGGTATTATGAGATACTTTCAGAGGAGAAGAGGTCCTCATCCTTTTGGAGTGCCTCCAATTTGGGGTGGTGAGTATGATCTGCAGCCAAATTTTGGTGTGAATCTCCCCCTTGCATACACACTGAGGCGAACTTTCTTTCCCCCATGTCATTTTTAG 1293 0.4269 MKLRLRSFESKETLKIEVPDPCSLQQLKSKISTILSSSSSLHLSLNRKDEITPPFPTDSLHSLGIATGDLIFYTFNPTAFSSQTLPHKPAAENPPTLPEKPAEPQTLEMADASDETAVKNNSEPDFVKRILKEALGDDVTDFKLLVFAVHAVIFESGFVRVDRDSAKAIDDFSSSSMISLRYTLPESVTKGLSHAVDLKIQTLGNFVNVYGSLVDDVGSRVHRVYLDKFRFAKPLELMLANSEPSGNASVGVSVDVNDGGDDEVFELWKIVKDKLALPLLIDLCEKAGLDLPPCFMRLPMELKLLIFEYLSGDDLAKVCCTCSELSYLASNDELWRKKFEEEFGDMMNGMKFFKNLFAHYWATKKKSKQKPPFFPTPRSGIMRYFQRRRGPHPFGVPPIWGGEYDLQPNFGVNLPLAYTLRRTFFPPCHF 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03265 430 Gene3D - 123 294 - -
Vifa3g03265 430 SMART fbox_2 298 338 IPR001810 GO:0005515
Vifa3g03265 430 MobiDBLite consensus disorder prediction 83 103 - -
Vifa3g03265 430 Pfam F-box-like 297 337 IPR001810 GO:0005515
Vifa3g03265 430 ProSiteProfiles F-box domain profile. 292 338 IPR001810 GO:0005515
Vifa3g03265 430 PANTHER F-BOX PROTEIN SKIP22 1 424 - -
Vifa3g03265 430 CDD F-box_AtSKIP22-like 294 339 - -
Vifa3g03265 430 Gene3D - 295 371 - -
Vifa3g03265 430 SUPERFAMILY F-box domain 292 350 IPR036047 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g03265 K10293 - gmx:100796338 453.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g03265 3 935037920 935039212 Vifa3g03265 3 935037920 935039212 ECH