Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03043 ATGGAGAAAACAGACGCTAAAGTTCGATGCCAGAGGATTGGTTGCGACGCAATGTTCACCGACGACGACAATCTTGATGGTTCATGTCAATACCATGAATCGCCTCTATTTCATAATGGGATGAAAGAATGGAGTTGCTGCAAGAAAAGAAGTCATGATTTCAGCTTGTTTTTGGAAATTCCAGGGTGTAAGACAGGAAAACATACGACAGAGAAGCAAGTAATTGCACCGATTAAGAAACAGTCTGTACCCACTTCAACTGCAGCTCCCTCAACCAATGTGTTGACGAAGGACTCTTCTTGTTCTAGGTGTCGACAGGGTTTCTTTTGCTCAGATCACGGCTCACAAGGCAAACCTGTAACTATTATTGGAGACAAACCTTTAAATCTTTCTGAAGATGCATCTGCAGAAAGCAGTTCAAGTGTTAAAGCTTCAAAACCTCAAAAAATAGTTGACATAAATGAGCCCCAAGTATGCAAAAATAAAGGGTGCGGTCTAACTTTCAAGGAAAGGGATAATCATGACTCCGCTTGCAGTTACCATCCTGGCCCTGCTGTTTTTCATGATCGGGTGAAAGGGTGGAATTGCTGTGATATTCATGTAAACGAATTTGATGAGTTTATGGCCATTCCTCCTTGCACAAAGGGATGGCATAATGCCGATCCAGTGTCCTGA 675 0.4252 MEKTDAKVRCQRIGCDAMFTDDDNLDGSCQYHESPLFHNGMKEWSCCKKRSHDFSLFLEIPGCKTGKHTTEKQVIAPIKKQSVPTSTAAPSTNVLTKDSSCSRCRQGFFCSDHGSQGKPVTIIGDKPLNLSEDASAESSSSVKASKPQKIVDINEPQVCKNKGCGLTFKERDNHDSACSYHPGPAVFHDRVKGWNCCDIHVNEFDEFMAIPPCTKGWHNADPVS 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03043 224 FunFam Cysteine and histidine-rich domain-containing protein RAR1 150 221 - -
Vifa3g03043 224 Pfam CHORD 9 68 IPR007051 -
Vifa3g03043 224 Pfam CHORD 158 218 IPR007051 -
Vifa3g03043 224 ProSiteProfiles CHORD domain profile. 159 218 IPR007051 -
Vifa3g03043 224 ProSiteProfiles CHORD domain profile. 10 68 IPR007051 -
Vifa3g03043 224 PANTHER CYSTEINE AND HISTIDINE-RICH DOMAIN-CONTAINING PROTEIN RAR1 4 223 IPR043316 -
Vifa3g03043 224 Gene3D - 151 221 - -
Vifa3g03043 224 Gene3D - 2 72 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g03043 K13458 - gmx:100194419 377.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g03043 3 870557753 870567108 Vifa3g03043 3 870557753 870567108 ECH