Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03041 ATGCTTTCCAAATCACTCCCCTCCTCCCCTGCATTCAGAATCGACACAAAAACCAAAACCTCTTTCTCAGTTATAATCCAATCATTTTTCTCAGTCCAAAATCCTCGAGCATGGATTCTCTTCTTCGTCCTCTTCATCCAGATCCTCCTCTTCTTCAACCTCCGTAGATTCCCAATCTCAATTCCCCCTCCACATCACCGCTTCCCCACTCGCCTTGCTCTCACCCAAACCGCCGCAATTCAAAACGGCACCGTCTTGGATTCTTCTCCCACAATCAACAACGATCAATGCGGTTCCGGTAGGGTTTATGTCTACGACCTTCCTAAATTCTTCAATCAAGAAATACTCGATAATTGTGACAATCTCAATCCATGGAGCTCCCGCTGTGACGCTCTCTCCAACAATGGATTTGGAAACAGCGCAGCAGTGGAATACTCCGGAATCATACCGGAGAATCTCCTTTCGTCATGGTACTGGACCGACCAATTCGTCTCGGAAATCATCTTTCACAACCGTATACTAAACCATAAATGCAGAACCATGAAACCAGAATCCGCTGCGGCGTTCTACATACCATTCTACGCTGGACTCGCGGTAGGTAAGTACTTATGGCTGAATACTTCCACCGCGAAAGATCGTGATCGTCACTGCGAGATGATGCTGACGTGGCTTCAGGACAAACCGCATTATAAAAAATCCAACGGCTGGGATCACTTCATCACGATGGGACGCATCACATGGGATTTCCGTCGCTCCAAAGACGAAGATTGGGGTTCTAGTTGCATCTACAAGCCAGGGTTGAGAAACATCACGCGCCTTCTCATAGAGAAAAACCCGTGGGACTATTTCGACGTCGGTGTTCCCTACCCTACCGGATTCCACCCCGATTCGTACTCCGATATCATTCGCTGGCAGAGTTTCGTCCGCCGACGCAGACGAAACTCGCTATTCTGCTTCGCCGGAGCGCCACGCCGCACTTTCCGCAATGATTTCAGGGCAATTCTGTTGAATCAATGCCGTGACTCGGGCGGATCGTGTCGTACGGTAGACTGCGGCGGGGCACGGTGCTTCAACGGAACATCGGCTATCACAGAAACCTTTTTGGACTCGGATTTTTGTTTGCAGCCGAGAGGGGATAGTTTCACGCGCCGGTCGATTTTCGATTGTATGATAGCCGGTTCGATACCGGTTTTTTTCTGGCGGAGAAGTGCATATTTACAATATCAATGGTTTTTACCGGAAGAACCGGGGAGTTACTCGGTTTATATAAACCGGGAAGCAGTAAAAAATGGAACTTCTGTTAAAGCAGTGCTTGAGAGTTACACCAAAGAAGAGGTAAGAAATATGAGGGAGAAAGTAATTGAGTACATTCCAAGGATGGTTTATGCAAAAGATAACAAAGGGATTGAGGGTGTTAAGGATGCATTTGATTATGCCATGGAAGGGGTGTTAACAAGGTTCAAGGAACAACTACAACCTGAGTTTCATAAGTGGAAGTAA 1500 0.4733 MLSKSLPSSPAFRIDTKTKTSFSVIIQSFFSVQNPRAWILFFVLFIQILLFFNLRRFPISIPPPHHRFPTRLALTQTAAIQNGTVLDSSPTINNDQCGSGRVYVYDLPKFFNQEILDNCDNLNPWSSRCDALSNNGFGNSAAVEYSGIIPENLLSSWYWTDQFVSEIIFHNRILNHKCRTMKPESAAAFYIPFYAGLAVGKYLWLNTSTAKDRDRHCEMMLTWLQDKPHYKKSNGWDHFITMGRITWDFRRSKDEDWGSSCIYKPGLRNITRLLIEKNPWDYFDVGVPYPTGFHPDSYSDIIRWQSFVRRRRRNSLFCFAGAPRRTFRNDFRAILLNQCRDSGGSCRTVDCGGARCFNGTSAITETFLDSDFCLQPRGDSFTRRSIFDCMIAGSIPVFFWRRSAYLQYQWFLPEEPGSYSVYINREAVKNGTSVKAVLESYTKEEVRNMREKVIEYIPRMVYAKDNKGIEGVKDAFDYAMEGVLTRFKEQLQPEFHKWK 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03041 499 Pfam Exostosin family 97 435 IPR040911 -
Vifa3g03041 499 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 101 482 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03041 Vifa-Chr3 869689195 869690694 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g03041 - - gsj:114403132 730.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g03041 3 869689195 869690694 Vifa3g03041 3 869689195 869690694 ECH