Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03037 ATGAAAGAGTTTCTTCTTCTTCTTCTTCTTGTGGCCTTTCGATTGACCCTCTCAGTCTCAGTGTCAGAGTCTCAATATGGTATACTCTTGCCTTATGCTCATGAATCCTTCAATTTCAGTTATATTAAGATGAAGAACGAGGCAAGTTGTTCTTACTCGGTGGTTATATCTACTAGCTGTTCGTCTCCTAGGTATACGAGGGATCAAATCAGTATTTCTTTTGGTGATGCTTATGGGAACCAGATAAATGCACCAAGACTAGATGATCCATCTTCTGGTACATTTGAGAGCTGTTCTTCCGATACATTTCAGATAAATGGTCCATGTGCATATCAGATATGCTATGTGTACCTCTATAGATCTGGCTCAGATGGTTGGAAACCCGACACTGTGAAGATCAATGGTTATAGTGGCGGTCCTGTTACTTTCTATTACAACACTTTCATTCCCAGAGATACATGGTATGGGTTTAATTTATGCAACGATGCTGCTTCTTCATACAAAGTGACTGCGCAGAAATTGCTAATGTTAGTTATTCTAGGACATATTCTGAGTTTCTGGTTGTAA 567 0.3933 MKEFLLLLLLVAFRLTLSVSVSESQYGILLPYAHESFNFSYIKMKNEASCSYSVVISTSCSSPRYTRDQISISFGDAYGNQINAPRLDDPSSGTFESCSSDTFQINGPCAYQICYVYLYRSGSDGWKPDTVKINGYSGGPVTFYYNTFIPRDTWYGFNLCNDAASSYKVTAQKLLMLVILGHILSFWL 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03037 188 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 49 157 IPR036392 GO:0005515
Vifa3g03037 188 CDD PLAT 50 161 - -
Vifa3g03037 188 Pfam Embryo-specific protein 3, (ATS3) 42 160 IPR010417 -
Vifa3g03037 188 Gene3D PLAT/LH2 domain 46 157 - -
Vifa3g03037 188 PANTHER PLAT DOMAIN-CONTAINING PROTEIN 5 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03037 Vifa-Chr3 864759588 864760534 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g03037 - - gmx:100305495 275.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g03037 3 864759588 864760534 Vifa3g03037 3 864759588 864760534 ECH