Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03005 ATGGCTTCTAACAACCCCTCGCTTCGCCCTGAGATCGGACCAGATGGTCTCGCGAGAGAAGCTTCCGTCATCGGCTATACCGAGAGGATCATCGAAGAGGAGCAGCTTCAATTGCAGAAATATATACAAGAAAACTATTCAAGAATCCGCAATGTGGAGCGTGAGCTTGCGAATCTCTCGCTTGAGATGAAACTTACAGCCGGCCCCAAAAAATCAGCACTTGAACATTTGAGGAAGAAAATAGAACAATCAACTGAGAAAATTCGTGTAGCCAAGATAAAAGAAGAACAGGCCCGTAAGGCATGGGAATCAGCCGTGCAAGCAGTGAAGGACGAGGAAACAATAAAGGAGAAGCTATGTGAAGATTTGAGCAATTTGGTTCAAGAAAGCAGTCAGTCTCAGTTTTCTCGGTTGGCGGAATTAAAAAGACGATTGGAAGCTATGAATCCAAGTCACATAACAACTAATCATGATGGGAGATCACAAAGTTCTTCTCAGGATAGTTCCTCTATTCCCAACGCCAGGGAATCAAGTGGGGGATCAGCCGCAAGTGTTAATACTGATCAAAGTAATGGTCAAAAAGTTGCAGTGACAGATAGACCTAATCAGCAACCACCTAATGAAGGCGAAGGTAGAAATAAAAAGAAAGTCAACTTCCAATTAAAAGGAAAGGGAATTGGTGCTGTGTCCAAGGGTAGATCTACTGCTCATGGGTGGACTGGTGCCGGCTTTGATGCATGA 741 0.4426 MASNNPSLRPEIGPDGLAREASVIGYTERIIEEEQLQLQKYIQENYSRIRNVERELANLSLEMKLTAGPKKSALEHLRKKIEQSTEKIRVAKIKEEQARKAWESAVQAVKDEETIKEKLCEDLSNLVQESSQSQFSRLAELKRRLEAMNPSHITTNHDGRSQSSSQDSSSIPNARESSGGSAASVNTDQSNGQKVAVTDRPNQQPPNEGEGRNKKKVNFQLKGKGIGAVSKGRSTAHGWTGAGFDA 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03005 246 Coils Coil 74 94 - -
Vifa3g03005 246 Pfam Transcriptional activator 26 146 IPR007033 -
Vifa3g03005 246 MobiDBLite consensus disorder prediction 151 208 - -
Vifa3g03005 246 MobiDBLite consensus disorder prediction 151 246 - -
Vifa3g03005 246 PANTHER ACI13 1 245 - -
Vifa3g03005 246 Coils Coil 42 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03005 Vifa-Chr3 855667109 855687190 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g03005 - - gmx:100801668 355.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g03005 3 855667109 855687190 Vifa3g03005 3 855667109 855687190 ECH