Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02998 ATGGGTTCTTCTAGAGGTGATTCAACATCATGGTATTGTGCTATAGTTTTATTGGGTATGATATTATTGGGATCAATAAGAGAGAGTACTGTGGCGGAAGGTGAATCGTCAGAAGTACGAGGGAACCAGTTTGGTGATAACAAGATGTGTGATGAGATATATGTTGTGGGAGAAGGAGAAACACTTCATACCATAAGTGAGAAGTGCGGTGACCCGTTTATTGTGGAGAGGAATCCACATATTCATGACCCGGATGATGTTTTTCCGGGGCTTGTCATTAGAATCATCACGCCGACCAATACTAGGAAGTTTTTGAAAAGATAA 324 0.4105 MGSSRGDSTSWYCAIVLLGMILLGSIRESTVAEGESSEVRGNQFGDNKMCDEIYVVGEGETLHTISEKCGDPFIVERNPHIHDPDDVFPGLVIRIITPTNTRKFLKR 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02998 107 CDD LysM 53 95 IPR018392 -
Vifa3g02998 107 Gene3D LysM domain 47 104 IPR036779 -
Vifa3g02998 107 Pfam LysM domain 54 95 IPR018392 -
Vifa3g02998 107 PANTHER EMBRYO SAC 1 6 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02998 Vifa-Chr3 849923703 849924026 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02998 - - qsu:112037248 157.532
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g02998 3 849923703 849924026 Vifa3g02998 3 849923703 849924026 ECH