Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02988 ATGGGGTCTAGTGTTTCTTCAACAGCATCTAATATTAGAGAAAAAGATGATTCTTCATCATCATCAAGAACTGGTCTTGGTGATCTTCCAGAAAGCTGCATCTCTTCTCTTCTCATGAATCTTGATCCACCTGATATATGCAAATTGGCTAGAGTCAACCGTGCTTTTCATAGAGCTTCTTCTTCTGATTTTGTGTGGGAATCAAAGTTACCATCATGCTACAAGTTTCTTGCTAGTAAAGTTCTTGATGAAGAAAGTGTTTCCACTATGACTAAGAAAGAGATCTATACAAAACTATGTCAAAGAAATCTCTTTGATGGTAATACCAAAGAAGTTTTGTTGGATAAATGCAGTGGACAAGTTTGTTTGTTCATGTCATCAAAGTCTTTGAAGATAACTGGAATAGATGATAGAAGATACTGGATTTACATTCCAACTGAGGAATCCAGGTTTAAGAATGTGGCTTATCTTCAACAAATGTGGTGGGTTGAAGTAGTAGGAGAGCTAGAGTTTTTATTCCCTGTGGGTAGTTACAGTGTAACTTTCAGAATAAAATTGGGAAAGCCGTCGAAACGGTTGGGCCGGCGCGTTTGCATCGTTGATCGAGTTCGTGGATGGGATGTAAAGCCGGTTAGATTTAAACTGACTACATCATACGGTGAATGTTCAATATCGGAGTGTTATTTGAATGAGTCGGGGGAATGGGTTTATTACCATGTAGGAGATTTTGTGGTTGTAAAGCCCAATGAGCCCATGAAAATTAAGTTTTCTTTGGCCCAAATTGATTGTACTCATACCAAAGGTGGGTTATGTGTAGATAGTGCAATTATTTGCCCAAGTGAGTTTAAAGAAAGACTCAAACAGTTTTAG 870 0.3805 MGSSVSSTASNIREKDDSSSSSRTGLGDLPESCISSLLMNLDPPDICKLARVNRAFHRASSSDFVWESKLPSCYKFLASKVLDEESVSTMTKKEIYTKLCQRNLFDGNTKEVLLDKCSGQVCLFMSSKSLKITGIDDRRYWIYIPTEESRFKNVAYLQQMWWVEVVGELEFLFPVGSYSVTFRIKLGKPSKRLGRRVCIVDRVRGWDVKPVRFKLTTSYGECSISECYLNESGEWVYYHVGDFVVVKPNEPMKIKFSLAQIDCTHTKGGLCVDSAIICPSEFKERLKQF 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02988 289 Pfam Phloem protein 2 121 279 IPR025886 -
Vifa3g02988 289 ProSiteProfiles F-box domain profile. 23 69 IPR001810 GO:0005515
Vifa3g02988 289 MobiDBLite consensus disorder prediction 1 26 - -
Vifa3g02988 289 MobiDBLite consensus disorder prediction 1 15 - -
Vifa3g02988 289 Gene3D - 12 118 - -
Vifa3g02988 289 SMART fbox_2 29 68 IPR001810 GO:0005515
Vifa3g02988 289 PANTHER F-BOX PROTEIN PP2-A15 10 286 - -
Vifa3g02988 289 CDD F-box_AtSKIP3-like 26 71 - -
Vifa3g02988 289 SUPERFAMILY F-box domain 16 98 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02988 Vifa-Chr3 843967417 843969842 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02988 - - gmx:100782620 473.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g02988 3 843967417 843969842 Vifa3g02988 3 843967417 843969842 ECH