Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02980 ATGAATTCTAGGAGAGACGTTGAAAGTGGTAGTGGAGGGACAAAGAACACCAACAATTACTCTGCTGCTGGAAATTCATCTTCATATGTTTATGATGCTGATAATCATAGGAATTCATGGCTTGTACCTGTTTTTGTGGTTGTTAACGTTGTTGTTTTCGTTGTGGCTATGGCTATTAACAATTGTCCCAAGAATAATTTTGGTTTTCAAGGTAATTGTGTTGCTGGGTTTCTTGGAAGATTCTCTTTCCAGCCTTTGAGGGAGAATCCATTGCTTGGTCCTTCTTCATCAACATTAACCAAGATGGGAGCTCTTAAATGGGAAAAAATTGTGCACCAGAATCAAGGGTGGAGACTCTTGACTTGCATTTGGTTACATGCTGGAATTATTCACTTGCTCTCAAACATGATATGCCTTGTCTTCATTGGCATTCGCCTCGAACAGCAATTCGGTTTTGTGAGAATTGGATTGATATACCTATTGTCTGGATTTGGTGGAAGTGTACTTTCTTCTCTTTTTATCCGAAATAGCATCTCCGTTGGTGCTTCCGGTGCACTTTTCGGACTTCTTGGAGCAATGCTATCAGAACTTCTTACAAATTGGACTATATATTCCAATAAAGTGATGGCTTTGCTCACTCTTCTAATTATCATTGCGGTCAATCTCGCAATAGGAATTTTGCCGCACGTTGACAACTTTGCTCACATCGGAGGATTTGCAACTGGACTTCTACTTGGTTTCATTTTACTTCCGCGTCCTCAATATGGTTGGTTACAGCAGCATCGTTTTCCTGCTGGTATTCGTCTCAAATCAAAATTCAAAGCTTACCAATACATTCTTGGAATTGTGTCTCTAATTCTCTTGATTGTTGGATTATCAATTGGATTGGTGATGCTGTTCAAGGGTGAGAATGGATATGATCACTGTCATTGGTGTCACTACCTAACATGTGTGCCAAGTTCTAAATGGGAATGCAACAATGAGAATTAA 990 0.396 MNSRRDVESGSGGTKNTNNYSAAGNSSSYVYDADNHRNSWLVPVFVVVNVVVFVVAMAINNCPKNNFGFQGNCVAGFLGRFSFQPLRENPLLGPSSSTLTKMGALKWEKIVHQNQGWRLLTCIWLHAGIIHLLSNMICLVFIGIRLEQQFGFVRIGLIYLLSGFGGSVLSSLFIRNSISVGASGALFGLLGAMLSELLTNWTIYSNKVMALLTLLIIIAVNLAIGILPHVDNFAHIGGFATGLLLGFILLPRPQYGWLQQHRFPAGIRLKSKFKAYQYILGIVSLILLIVGLSIGLVMLFKGENGYDHCHWCHYLTCVPSSKWECNNEN 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02980 329 Gene3D - 33 252 IPR035952 -
Vifa3g02980 329 FunFam RHOMBOID-like protein 35 252 - -
Vifa3g02980 329 PANTHER RHOMBOID-RELATED 14 325 IPR002610 GO:0004252|GO:0006508|GO:0016020
Vifa3g02980 329 Pfam Rhomboid family 111 253 IPR022764 GO:0004252|GO:0016020
Vifa3g02980 329 SUPERFAMILY Rhomboid-like 36 254 IPR035952 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02980 Vifa-Chr3 840563825 840565672 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02980 - - gmx:100809265 471.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g02980 3 840563825 840565672 Vifa3g02980 3 840563825 840565672 ECH