Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02945 ATGGACGACGTTGTTTCGAACACTAGGAGATGGGAGGATCTGGACACAGATATTCTGGTGAAGATCTTTCAGTTGTTTGACATTTTCGAGTTAACATCTGGTGTTGCTCATGTTTGTAGCGCGTGGCGCGCGGCTTGCTGTGATCAGCTTCGTTGGAAGACACTTGATTTGTCAATGTTGCGGTCTAATTTCATCAAGATTCCGTTAGAGCCGTTTGTTTATGTCGATGAACGGTCTGATAAGATTTTGACCCGTTTGTTGAAGATTTCGTTGAGTCTCAGTAGGCAGAGTATTGTGACATTGATCTTCCATTTCAACTTGTATGTAAGTGATGATATGTTGACATACACCGCTGAAAGGAGCCCACAACTCAAACGACTGGTTCTGCCGGCTTGGAACAGAATCAAGAGAACGGGAATGTGCAAGGCCATCCGTTGCTGGAAAAAGCTGGAGTCTCTGACAATGCCTAGTATAGCGAACCCGCCGTATTTTCTCGAGGAAATTGCGATAAACTGCGGGAATTTCAATGAACTCAAGATTATGGGTCCGTGTGACATCTTCTTTGCTTCAACTCTTGCTGCATTTGTTCCAAAATTGAGAGTCTTGAGCCTTCGTTGTACGACGCTATACGTGGATGTGCTCATTCTCATCCTAGACAGCTTAAAACATTTAGAAGTGCTCAATATATCGCACTGCGTTCTAATGGAAGCCCTTCCTCCTCCTCAATATAAAAGAATTGTCACTGAAATTGATCCGGCTATTCACCAGAAGGCTTCTCGGCTGCGTGAATTCTTCACATGCATGGATGACTCATGCATCATGTGCCAGCGAACTCGAACTGATGAAGGGATCGTTAGGTGGTACAAGTACGAAGAAGGGTTTTGGAAAGAAGATGAGGTGAGGTCTCTTGCACTTTAA 918 0.4434 MDDVVSNTRRWEDLDTDILVKIFQLFDIFELTSGVAHVCSAWRAACCDQLRWKTLDLSMLRSNFIKIPLEPFVYVDERSDKILTRLLKISLSLSRQSIVTLIFHFNLYVSDDMLTYTAERSPQLKRLVLPAWNRIKRTGMCKAIRCWKKLESLTMPSIANPPYFLEEIAINCGNFNELKIMGPCDIFFASTLAAFVPKLRVLSLRCTTLYVDVLILILDSLKHLEVLNISHCVLMEALPPPQYKRIVTEIDPAIHQKASRLREFFTCMDDSCIMCQRTRTDEGIVRWYKYEEGFWKEDEVRSLAL 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02945 305 Pfam F-box-like 16 57 IPR001810 GO:0005515
Vifa3g02945 305 SUPERFAMILY F-box domain 10 61 IPR036047 GO:0005515
Vifa3g02945 305 Gene3D Ribonuclease Inhibitor 6 250 IPR032675 -
Vifa3g02945 305 PANTHER F-BOX DOMAIN CONTAINING PROTEIN, EXPRESSED 8 246 - -
Vifa3g02945 305 SUPERFAMILY RNI-like 96 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02945 Vifa-Chr3 827881578 827882805 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02945 - - gmx:100789355 515.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g02945 3 827881578 827882805 Vifa3g02945 3 827881578 827882805 ECH