Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02932 ATGTTCAAATCATGGAGCAAGAAAAACAAGATCAAAGCTGTGTTCAAATTGGATTTTCAAGCAACCCAGGTTCCGAAGATGAAAAAGTCTGCACTGATGGTATCTTTGGTGCCAGATGATATTGGGAAAACAACGGTGAAATTAGAGAAAACTGCTGTGCAAGATGGGACTTGTTTATGGGAGAATCCAATTTTTGAACCTGTTAAACTTGTTAGGGATTCAAAATCGGGAATTCTCCATGAGAAAATCTACCATTTCATTGTTTCAACTGGTTCTTCGAAATCGGGCTATTTGGGAGAAGCTTCGGTTGATTTTGCTGATTTTTTAGCAGAAACTGATCCGGTTACAGTTTCTTTACCTTTGAAGTTTGCCAATTCAGGCGTAGTGTTACATGTAACTATTCAGAATGTTGAAGGATATGCTGCTGAAAGAAATGGGGAAGATAATGGAGCCGTTGGACTTCAAAATGACGGAAGCTTGAGACATCAACTGAGCTATGGCAGTACAGATGAAAGTTATAATCTTGATGAAAATGAGAACTTGGCCAAGAGTAGATCTGAGTATTCTGAACAGAATGCATCGAATGGCGTCAGTCCTAGGGTAGCTTCATGGGATGACCCTCATAGCTTCAGGCAGAACTCAATGCCACCAAGAGGACCGGTTGAAACCAACGCAACACAAAATCAAGTGCATAAGCGGTCGAATACAGGATGGTCGATTGGTTCAGCATCAGACGGAAGTTTAGGTGACTGGACAAACAGCGCGGAAGAGAATATTCCAAGAGAAAGATTACAAGAGCCTTCCGGCAATGCCACTGAAAATCTCAAAAGTGAAATCGCTTCTCTGAAGAGGCAGGCAGAATTATCGGAACTGGAGTTACAAGCACTTCGGAAGCAGGTAGAAAAAGAAAGCAGTCGGGGACAGAATTTATCGAGACAAATCAACGGTCTCAGAGACGAGAGAGATTCTCTCAAAACTAAATATGAGCAACTCAGGTCCCAGCAGAATTTCAATAGTATTAATAACGAGACCAAAACATCTAAAACCTTGAAGTCGGATGTTGAAAATACTAGAATTCAGTTAGAGGCATTAAAGGAAGAGCTTGTTTATGAAAAAGAAACAAGTGGAAATCTTCAGTTGCAACTTCTGAAAACACAGAACTCAAATTCTGAACTTCTTTTGGCTGTGACAGACCTTGAAGAAATGCTAGAACAAAAGAACAAGGAAATATTGGATCTATCTTCCAAAATGAAATCTCAAAAGATTGCTAAAGAGCGTGATATAGACACAGAATTAGATGTTCTGCGGCAGAAAATTGCAGAACAGAATAGTGAAATAGAGAGTTGCGTTAAGCAACGCGAGGAGCTAAGTACTCTTTTAAAAGAGCTCACATTGGAGTATGATATTCTTGAGAATGAAAATGAGGATATCTCAACGAAATTAAAGCAAGAGGAAGCACAGCATGTCATGTTACAAAATGAGCACTCGGCTTCTTTAGTTACGATACAACAACTTGAATCCCAAGTAAAGAGACTTGAAGAAAACATAGAGATGCGGGAAGATGAATTTTCATCTTCTTTGGTCTCCATCAAGGAACTTGAAAATGAAGTTAAGTCTTCGGAGAAAGAACTGAGAATACAGGCAGATAAATACAAAGAAGATCTCCATGCCATGCAAAGTGCAAAAATCGTGCAGGAAGAACGGGCCATTCAAGCAGAAGAGTCACTGAGAAAGACGAGACACAATAATGCTATCGCATCTGAGCGTCTTCAGGAAGAATATAAATCTCTTTCTGTTGAAATGGCGTGCAAAGTTGAAGAGAACGAAAAGATGATCGCGAAAGAAATTGCAGAAGCTGATCAATTGCGGAACCACAACAAGCTTATGGAAGAAACGCTCCAGAAATGTAATCAAGAGCTCAGGCTTATTACAGATCAACATGAATCGAAAGTGGAAGAGCTATTGAAACAAATAAATTCTAAAGAAAAAACAATAGAACAGATGTCACGAGAGCTAGAAGTGAAGACTAAAGAACTCGAGGATGCACAAAGGCTCAGGGATGAAAAGGATGCTACATTTTCAAAGAAAATTCAAATGCTTGAAATCCAGCACAATGAAATAAAACAAAGTTTGCAGAAAGAACAAGTGGACAAAGAAAATATGAAGAAACATATATCTCAATTAGAAGGAGAGCTTAAGAAGAAAGAAGCAGAACTAAGTGCTATGGAAAAGAAGCTCAAGAATAACAAAGGACGAGGTGCAGCTATGCATATGAATTTGACCTCAAGAGACAATGAAGCTGCTAAGGGTAATGTTAAGAAGTCAAAATCAGAAATGCATAAGGGAAATGATGCTGCAAACACTTCTATTAGCAAGTCCGAAGAAAGTGAGGCGGAACGCCTTTCAAAGGAATTATTGAAAGAAGTGGAAGTTCTAAAGGGAAAGAACACGACTATGGAAACAGAACTGAAAGAAATGGAAGAAAGATATTCAGAGATTAGTCTGAAATTTGCAGAGGTAGAGGGAGAAAGACAACAACTTGTTATGGCTGTACGCAATCTCAAGAATGGTAAGAAGATCTAG 2583 0.3902 MFKSWSKKNKIKAVFKLDFQATQVPKMKKSALMVSLVPDDIGKTTVKLEKTAVQDGTCLWENPIFEPVKLVRDSKSGILHEKIYHFIVSTGSSKSGYLGEASVDFADFLAETDPVTVSLPLKFANSGVVLHVTIQNVEGYAAERNGEDNGAVGLQNDGSLRHQLSYGSTDESYNLDENENLAKSRSEYSEQNASNGVSPRVASWDDPHSFRQNSMPPRGPVETNATQNQVHKRSNTGWSIGSASDGSLGDWTNSAEENIPRERLQEPSGNATENLKSEIASLKRQAELSELELQALRKQVEKESSRGQNLSRQINGLRDERDSLKTKYEQLRSQQNFNSINNETKTSKTLKSDVENTRIQLEALKEELVYEKETSGNLQLQLLKTQNSNSELLLAVTDLEEMLEQKNKEILDLSSKMKSQKIAKERDIDTELDVLRQKIAEQNSEIESCVKQREELSTLLKELTLEYDILENENEDISTKLKQEEAQHVMLQNEHSASLVTIQQLESQVKRLEENIEMREDEFSSSLVSIKELENEVKSSEKELRIQADKYKEDLHAMQSAKIVQEERAIQAEESLRKTRHNNAIASERLQEEYKSLSVEMACKVEENEKMIAKEIAEADQLRNHNKLMEETLQKCNQELRLITDQHESKVEELLKQINSKEKTIEQMSRELEVKTKELEDAQRLRDEKDATFSKKIQMLEIQHNEIKQSLQKEQVDKENMKKHISQLEGELKKKEAELSAMEKKLKNNKGRGAAMHMNLTSRDNEAAKGNVKKSKSEMHKGNDAANTSISKSEESEAERLSKELLKEVEVLKGKNTTMETELKEMEERYSEISLKFAEVEGERQQLVMAVRNLKNGKKI 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02932 860 Coils Coil 697 752 - -
Vifa3g02932 860 ProSiteProfiles C2 NT-type domain profile. 3 138 IPR019448 -
Vifa3g02932 860 MobiDBLite consensus disorder prediction 216 253 - -
Vifa3g02932 860 MobiDBLite consensus disorder prediction 763 798 - -
Vifa3g02932 860 Coils Coil 530 561 - -
Vifa3g02932 860 Coils Coil 587 692 - -
Vifa3g02932 860 Coils Coil 432 522 - -
Vifa3g02932 860 MobiDBLite consensus disorder prediction 185 199 - -
Vifa3g02932 860 Coils Coil 389 416 - -
Vifa3g02932 860 MobiDBLite consensus disorder prediction 156 175 - -
Vifa3g02932 860 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 797 859 - -
Vifa3g02932 860 MobiDBLite consensus disorder prediction 767 781 - -
Vifa3g02932 860 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 7 135 IPR019448 -
Vifa3g02932 860 Coils Coil 272 334 - -
Vifa3g02932 860 Coils Coil 347 374 - -
Vifa3g02932 860 MobiDBLite consensus disorder prediction 146 253 - -
Vifa3g02932 860 Coils Coil 809 843 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02932 Vifa-Chr3 823375217 823379498 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02932 - - vun:114190970 1197.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g02932 3 823375217 823379498 Vifa3g02932 3 823375217 823379498 ECH