Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02914 ATGGCTCCGAAGTGGGGAATCAAGTTCGCCGTCTACCTCATCACCAACCACTTCGGCAAAATCGTCGCTAAAGTTTGCGAAAATCTACTTGACCATGGCGCTCTCACTCTGGACCTGGTTATTCGATACACGGAACTTTCCCCGGAGCATGTTAAGAACTCATTGCTTGTGTTGATTCAACATAATTGCGTCCAGGCTTTTGTTGCCCAAGGTGGTGATGAAGATGGGTCGAGAGCTAAGACGCAATACATGGTGTTGTTTGACAACATACTCCATCGATTAAGATTTCCGAAATTCATGGAGATAGTGTCGGGGGAACTTGATGACAAATGTGCAAAAATTTTTGAAGGTTTGCTCCGCGATGGTAGACTTAACACGAAACAGATGGTTGACAGAGAAAGTCAAGGAAAAGAAAATGCGGTGGCTGCAGCTGCTGTACGAGAGAGCCTTCTTAAACTTCTGATGGCTCGATATGTTGAGCGCTGTCCACTCCCTGAGGCTAGGGTAGTTGAAGGAGAAATTATTACTAAGAAGCGTGGTGCTAAGGGGGCCCAGAATTTCAAAGCACCAGCAACAACAGAACAACGTGTTATAGAAGCTGCAGTGCGTGGGGATATGATTAGATTTTCACTCAATGCAGATATAGGATGTAATAGTGATGGAGAAACAAATCCAGCTGATACAAGCGTTGCAGAAAATAATGCAAAAGAGGACTTAATTCTTTGGCGTGCAAATTTTGAGGAGTTCACGCGTCATCTCAGGGATAAGGCACTGATTGAGAATGTAAGAGCACGGATAGACGATGGAGCTGCTATTGTCTTAAGTGCAATATTGAAGGCAACAAGAGCTAAAGATAAAGAAGTGAAAATAGAGAAATCAGGTGATCTAGAGTCCGCTTCACGAATTCTGGAAATTTATGATGTTAATATTCATGTCTATGGGCCGATACATATGTAG 957 0.4336 MAPKWGIKFAVYLITNHFGKIVAKVCENLLDHGALTLDLVIRYTELSPEHVKNSLLVLIQHNCVQAFVAQGGDEDGSRAKTQYMVLFDNILHRLRFPKFMEIVSGELDDKCAKIFEGLLRDGRLNTKQMVDRESQGKENAVAAAAVRESLLKLLMARYVERCPLPEARVVEGEIITKKRGAKGAQNFKAPATTEQRVIEAAVRGDMIRFSLNADIGCNSDGETNPADTSVAENNAKEDLILWRANFEEFTRHLRDKALIENVRARIDDGAAIVLSAILKATRAKDKEVKIEKSGDLESASRILEIYDVNIHVYGPIHM 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02914 318 Gene3D - 245 311 IPR036388 -
Vifa3g02914 318 FunFam DNA-directed RNA polymerase III subunit RPC3 2 85 - -
Vifa3g02914 318 PANTHER RNA POLYMERASE III DNA DIRECTED -RELATED 5 294 IPR039748 GO:0003697|GO:0005666
Vifa3g02914 318 Gene3D - 87 170 IPR036388 -
Vifa3g02914 318 FunFam DNA-directed RNA polymerase III subunit rpc3 87 169 - -
Vifa3g02914 318 Pfam RNA polymerase III subunit RPC82 helix-turn-helix domain 11 68 IPR013197 -
Vifa3g02914 318 Pfam RNA polymerase III subunit RPC82 149 290 IPR008806 GO:0003677|GO:0006351
Vifa3g02914 318 Gene3D - 4 76 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02914 Vifa-Chr3 819742159 819748071 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02914 K03023 - gmx:100803947 365.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g02914 3 819742159 819748071 Vifa3g02914 3 819742159 819748071 ECH