Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02877 ATGATGATGAAGAGCCACACAATATTCCTATTTAGAATCATTTTTCTTTTTATGTTTCTTGGATGGCTAACAGTTTGGATCTTGTATCCCACAAAGATATACCACAAGACATGGATTGTCAACCTAGAAAACAAGTTCGATTCTACATATTTTAGAGAGCAAGTTGTTTTAGGGGTAAATCTCCTGCTTTTTACATTCCCTATCATGTTCATTGGAGCTCTTGGTGGTATTTATCTTCATCTTCATCAGGAAAAAATAACACAAAAGTTACCCTCCACAAGTGGTGGTGCTCTAAAAAGATGTATATGTTACCTGAAACGTCCATTCCTGGTGATGTCTCCATTTGGGATAGTTTCAGCTATGGAGCTTCTTTTTGCACTCATGTTTGTTGCACTTTTGATATGGTCTCTTGCCAATTACTTATATAGAAGTTTTGGTCACCTCCATATGCACAAACAAGACGAGAAAGTATGGGAAGCAAAGTTTAGGAGTGTATCATTGAGACTTGGTTACATAGGAAACGTATGTTGGGCATTTTTGTTCTTTCCAGTCACAAGAGGGTCTTCAATTCTGCGTCTGGTTGGACTAACATCTGAGTCAAGCATCAAATACCATATTTGGCTTGGACATTTATCGATGGTTCTTTTTGCTGCTCATACCATTGGTTTTATCATCTATTGGGCCATCACCAATCAAATGATTGAGATGCTGGAGTGGAGCAAGACATATGTGTCAAATGTAGCTGGGGAGATTGCAAGTGTAATAGCATTTGCAATGTGGATAACAAGTATTTCACGTATAAGGCGTAAGATGTATGAAGTTTTCCTCTATACTCACCATCTTTACATTCTCTATATCTTATTCTATGCAATCCATGTTGGAGTTGAATACATGTGCATGATTGCTCCTGGGATTTTTCTATTCTTCGTTGATAGACATCTTAGATTCTTACAGTCTTGCCAAAATATTCGGTTATTATCAGCTCGCATTTTGCCTTGTGATGCACTTGAGCTCAACTTCTCCAAGAACCCTAGTTTATACTATAATCCAACAAGCTTGGTGTATATAAATGTGCCAAAGGTTTCCAAGCTGCAATGGCACCCTTTTACAGTGACTTCTAGTTGTAATATGGAAACTAATCATCTGAGTGTTACCATAAAAAATGTGGGTAGCTGGTCAAACAAGCTTTACCAACAACTTTCTTCTTCATCTTCGGATCATCTTAATGTTTCTGTTGAAGGACCCTATGGACCTCAAACTAAACAATTTCTAAGGCATGAACAGATTGTGATGCTTCTGGTTCAAGAACTCAAATCTCAAACCTTAATTTACAAATTGAAGCTTACATCACAAGAGAAACACAAGAACCTTCAACAGAAACTCAAAAACCTATCCAAACAATATGGTTTAAGCCAAACCTCTCAGATTCTCCTATCTCAGTTGTATTAG 1449 0.3727 MMMKSHTIFLFRIIFLFMFLGWLTVWILYPTKIYHKTWIVNLENKFDSTYFREQVVLGVNLLLFTFPIMFIGALGGIYLHLHQEKITQKLPSTSGGALKRCICYLKRPFLVMSPFGIVSAMELLFALMFVALLIWSLANYLYRSFGHLHMHKQDEKVWEAKFRSVSLRLGYIGNVCWAFLFFPVTRGSSILRLVGLTSESSIKYHIWLGHLSMVLFAAHTIGFIIYWAITNQMIEMLEWSKTYVSNVAGEIASVIAFAMWITSISRIRRKMYEVFLYTHHLYILYILFYAIHVGVEYMCMIAPGIFLFFVDRHLRFLQSCQNIRLLSARILPCDALELNFSKNPSLYYNPTSLVYINVPKVSKLQWHPFTVTSSCNMETNHLSVTIKNVGSWSNKLYQQLSSSSSDHLNVSVEGPYGPQTKQFLRHEQIVMLLVQELKSQTLIYKLKLTSQEKHKNLQQKLKNLSKQYGLSQTSQILLSQLY 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02877 482 Coils Coil 447 467 - -
Vifa3g02877 482 SFLD Ferric reductase subgroup (FRE) 11 431 - -
Vifa3g02877 482 SFLD Ferric Reductase Domain 52 431 - -
Vifa3g02877 482 Pfam FAD-binding domain 322 419 IPR013112 GO:0016491
Vifa3g02877 482 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 318 422 IPR017927 GO:0016491
Vifa3g02877 482 CDD NOX_Duox_like_FAD_NADP 325 431 - -
Vifa3g02877 482 PANTHER NADPH OXIDASE 17 431 - -
Vifa3g02877 482 Pfam Ferric reductase like transmembrane component 170 288 IPR013130 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02877 Vifa-Chr3 808356714 808367470 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g02877 10 432 Miscellaneous Gene Families AT5G23980 55.189 2.82e-162 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02877 K00521 - gmx:112998154 645.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g02877 3 808356714 808367470 Vifa3g02877 3 808356714 808367470 ECH